| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755786
Identifier: 170755786
GI number: 170755786
Start: 2701931
End: 2702980
Strand: Reverse
Name: 170755786
Synonym: CLD_2045
Alternate gene names: NA
Gene position: 2702980-2701931 (Counterclockwise)
Preceding gene: 170754745
Following gene: 170756871
Centisome position: 68.29
GC content: 25.33
Gene sequence:
>1050_bases ATGGAATATATAAAAGAAGTTAATATAAATGAGGCAGTAGTGCATATATTGGACAACAATAGTGAGGAGCCAGTGTTAAA TGAATATAAATTAAGATTGGATGATGAATGTTATAAATATATATTAAAACATATAGATAAATGTTTAAAGGATGAATGTT TAAGATATGCAAAATTTAATGAAGAGAAAAATGTAGTAAAAGATATTTCACAAGAATATTTAAATGGCCAAAATGATTTA TTAGATGTTTCTAAGGAATTGGCTAGACAACTTTTTATATTAATGAAAGGCAATGATAATATATCTTCTTGCGATTTAAT GATAGTTTCTATATCAACAGAATATGGCCCAATGTTAGCCATATTAAAAATGGATTATGTTAAAAATTATATTCATGTAG TGGATATGGTAGAGGATAAAGTAGGTATAGATATAGTTCCAGAGTTTACAGGATTACCTGCTAGTGCTCAAAAGATACAA AAATGTGCATTTATAAAACCTATAAGAGAAAATCAAGAATTTAATTTAATGGTTATAGATAAACAGAAGAAAATTAAAAC TAGTGAAGAATATGGCTCTAATTATTTTATAAATAAATATTTAGGTTGCAGCATAATAGAAAATGAAAGGGATACTACAA AGAATTTTGTACAAGCTACGGAAAAGTGGGTTAAAACTAATCTAAATGAAAATGCAGATACATCAGAAAAAATAATAAGA ACAGTAGACAAGCTATTAAAAGAAAAAGATACCATAGATATAAATGAAATTTCCAATAATATATTTGGGGAAAATTCAGA TGCTAAATTAAACTATGAAGGATTTATTGCAGAGCAGGGTATAAAAGAAAAAATAGATGTAGACAAGGAATGGGTAGATA AAAAATTTAAAAGAATAAGATTAAAGATAGATAGAGACATAGATTTATATATAGATGAAGAATCTTATCATGATGAATCA AGGTTTGAAGTTAAAAGAGTAGGGGATGGATCTATAAATATAATAATTAAAAATGTTTATAATTATATGCAAAAGATAAG TGGAAAATAA
Upstream 100 bases:
>100_bases TAAATGCAGGAAACCCTTATGTAGTATGTGCATATTGTGGGGAAATCAATAATACTAAACTAACATTAGGATAGTTGATA ATTTAAAAGGAGTGAAATAT
Downstream 100 bases:
>100_bases AAATTAAATAGGTGTAAGGATTAAAGCGTGTATTCTTGCACCTTAGCTGTATTAGTGTATTATTACAATAATATAAAAAA GGAGATTAATTATGGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MEYIKEVNINEAVVHILDNNSEEPVLNEYKLRLDDECYKYILKHIDKCLKDECLRYAKFNEEKNVVKDISQEYLNGQNDL LDVSKELARQLFILMKGNDNISSCDLMIVSISTEYGPMLAILKMDYVKNYIHVVDMVEDKVGIDIVPEFTGLPASAQKIQ KCAFIKPIRENQEFNLMVIDKQKKIKTSEEYGSNYFINKYLGCSIIENERDTTKNFVQATEKWVKTNLNENADTSEKIIR TVDKLLKEKDTIDINEISNNIFGENSDAKLNYEGFIAEQGIKEKIDVDKEWVDKKFKRIRLKIDRDIDLYIDEESYHDES RFEVKRVGDGSINIIIKNVYNYMQKISGK
Sequences:
>Translated_349_residues MEYIKEVNINEAVVHILDNNSEEPVLNEYKLRLDDECYKYILKHIDKCLKDECLRYAKFNEEKNVVKDISQEYLNGQNDL LDVSKELARQLFILMKGNDNISSCDLMIVSISTEYGPMLAILKMDYVKNYIHVVDMVEDKVGIDIVPEFTGLPASAQKIQ KCAFIKPIRENQEFNLMVIDKQKKIKTSEEYGSNYFINKYLGCSIIENERDTTKNFVQATEKWVKTNLNENADTSEKIIR TVDKLLKEKDTIDINEISNNIFGENSDAKLNYEGFIAEQGIKEKIDVDKEWVDKKFKRIRLKIDRDIDLYIDEESYHDES RFEVKRVGDGSINIIIKNVYNYMQKISGK >Mature_349_residues MEYIKEVNINEAVVHILDNNSEEPVLNEYKLRLDDECYKYILKHIDKCLKDECLRYAKFNEEKNVVKDISQEYLNGQNDL LDVSKELARQLFILMKGNDNISSCDLMIVSISTEYGPMLAILKMDYVKNYIHVVDMVEDKVGIDIVPEFTGLPASAQKIQ KCAFIKPIRENQEFNLMVIDKQKKIKTSEEYGSNYFINKYLGCSIIENERDTTKNFVQATEKWVKTNLNENADTSEKIIR TVDKLLKEKDTIDINEISNNIFGENSDAKLNYEGFIAEQGIKEKIDVDKEWVDKKFKRIRLKIDRDIDLYIDEESYHDES RFEVKRVGDGSINIIIKNVYNYMQKISGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40759; Mature: 40759
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYIKEVNINEAVVHILDNNSEEPVLNEYKLRLDDECYKYILKHIDKCLKDECLRYAKFN CCCHHHCCCCHHEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EEKNVVKDISQEYLNGQNDLLDVSKELARQLFILMKGNDNISSCDLMIVSISTEYGPMLA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCCHHHH ILKMDYVKNYIHVVDMVEDKVGIDIVPEFTGLPASAQKIQKCAFIKPIRENQEFNLMVID HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCHHCCCCCEEEEEEC KQKKIKTSEEYGSNYFINKYLGCSIIENERDTTKNFVQATEKWVKTNLNENADTSEKIIR CCHHCCCHHHHCCCEEEHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TVDKLLKEKDTIDINEISNNIFGENSDAKLNYEGFIAEQGIKEKIDVDKEWVDKKFKRIR HHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCCCHHHCCCHHHHCCCHHHHHHHHHHEE LKIDRDIDLYIDEESYHDESRFEVKRVGDGSINIIIKNVYNYMQKISGK EEECCCEEEEECCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCC >Mature Secondary Structure MEYIKEVNINEAVVHILDNNSEEPVLNEYKLRLDDECYKYILKHIDKCLKDECLRYAKFN CCCHHHCCCCHHEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC EEKNVVKDISQEYLNGQNDLLDVSKELARQLFILMKGNDNISSCDLMIVSISTEYGPMLA CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCCHHHH ILKMDYVKNYIHVVDMVEDKVGIDIVPEFTGLPASAQKIQKCAFIKPIRENQEFNLMVID HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCHHCCCCCEEEEEEC KQKKIKTSEEYGSNYFINKYLGCSIIENERDTTKNFVQATEKWVKTNLNENADTSEKIIR CCHHCCCHHHHCCCEEEHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TVDKLLKEKDTIDINEISNNIFGENSDAKLNYEGFIAEQGIKEKIDVDKEWVDKKFKRIR HHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCCCHHHCCCHHHHCCCHHHHHHHHHHEE LKIDRDIDLYIDEESYHDESRFEVKRVGDGSINIIIKNVYNYMQKISGK EEECCCEEEEECCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA