| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is corA [H]
Identifier: 170755755
GI number: 170755755
Start: 83266
End: 84207
Strand: Reverse
Name: corA [H]
Synonym: CLD_0736
Alternate gene names: 170755755
Gene position: 84207-83266 (Counterclockwise)
Preceding gene: 170757359
Following gene: 170754739
Centisome position: 2.13
GC content: 25.58
Gene sequence:
>942_bases ATGATTTCCATTTATAAAAATACTGAACAAGACAAAACAATAAAAAAATTAGATAACATAGAACCTGGCACCTGGATTAA TATAGTGTCACCTTCGGAACAAGAGCTTATTTTTGTATCAAAAAAAACTGGAGTTTCTTTAGATTTTTTAAAAGCTTCTT TAGATGAAGAAGAAACTTCACGAATAGACATTGAAGATAATAATATGATAGTAATCTTAGATATACCATTTACTGAAATG GAAGATAATTCATTGACTTACGATACTTATCCTTTAGCTATTATAAATACACCGAATAATATTATTACTGTATGTTTAAA AAATAGCAAAATTTTAACAGACTTTTTTAATAATAAAGTAAAATCTTTTTATACTTTTAAAAGATCTAGATTTATTCTGC AAATATTATATAGAGTAGCCAGCTATTTTCTTTTGTATTTGAGACAAATAGATAAAAAAAGTGTGATGATAGAGAAAAAG CTTCATAAATCTATGAAGAATAGAGAACTTATTCTTTTATTATCTCTAGAAAAATCTTTAGTTTATTTTTCTACTTCCCT AAAGGCTAATGAAATAACCTTAGAAAAAATGTTAAAGCTAGATATAATACAAAGATATCCTGAGGATCAAGATATATTGG AAGATGTTATTATAGAAAATAAACAAGCAATAGAAATGGCTAATATATATAGTAATATTTTAAGTGGAACTATGGATGCC TTTGCATCTGTTATATCTAATAATCTAAACATAGTTATGAAGTTATTAGCATCTATAACTATAGTAATGTCTATACCTAA TATAATTTTTGGCTCCTTTGGGATGAACTTAAATGGTATCCCTTTTAGTAAGTCTTCACAGGGATTTGGGCTTGCTTGTG GAGTTACAGTTATATTATGTATAGTTTGTATAATAATATTGAAAAAAAAGGACTTATTCTAA
Upstream 100 bases:
>100_bases ATTTGGGTACATGCTGTATAATATATATTATTGGTTCTTATAATTATTTTTAAAACATAAATTAGAACATTAATAAATTT TACATATTGAGGTGATTTTC
Downstream 100 bases:
>100_bases TGAATTACATATAATTAATTATTAGGAGTGATTTAATGTTATTAAAGCATTTAAACAAAGGAGGTACTATAGGAATAGTT TCTCCTGCAAGTCCTATTGA
Product: CorA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MISIYKNTEQDKTIKKLDNIEPGTWINIVSPSEQELIFVSKKTGVSLDFLKASLDEEETSRIDIEDNNMIVILDIPFTEM EDNSLTYDTYPLAIINTPNNIITVCLKNSKILTDFFNNKVKSFYTFKRSRFILQILYRVASYFLLYLRQIDKKSVMIEKK LHKSMKNRELILLLSLEKSLVYFSTSLKANEITLEKMLKLDIIQRYPEDQDILEDVIIENKQAIEMANIYSNILSGTMDA FASVISNNLNIVMKLLASITIVMSIPNIIFGSFGMNLNGIPFSKSSQGFGLACGVTVILCIVCIIILKKKDLF
Sequences:
>Translated_313_residues MISIYKNTEQDKTIKKLDNIEPGTWINIVSPSEQELIFVSKKTGVSLDFLKASLDEEETSRIDIEDNNMIVILDIPFTEM EDNSLTYDTYPLAIINTPNNIITVCLKNSKILTDFFNNKVKSFYTFKRSRFILQILYRVASYFLLYLRQIDKKSVMIEKK LHKSMKNRELILLLSLEKSLVYFSTSLKANEITLEKMLKLDIIQRYPEDQDILEDVIIENKQAIEMANIYSNILSGTMDA FASVISNNLNIVMKLLASITIVMSIPNIIFGSFGMNLNGIPFSKSSQGFGLACGVTVILCIVCIIILKKKDLF >Mature_313_residues MISIYKNTEQDKTIKKLDNIEPGTWINIVSPSEQELIFVSKKTGVSLDFLKASLDEEETSRIDIEDNNMIVILDIPFTEM EDNSLTYDTYPLAIINTPNNIITVCLKNSKILTDFFNNKVKSFYTFKRSRFILQILYRVASYFLLYLRQIDKKSVMIEKK LHKSMKNRELILLLSLEKSLVYFSTSLKANEITLEKMLKLDIIQRYPEDQDILEDVIIENKQAIEMANIYSNILSGTMDA FASVISNNLNIVMKLLASITIVMSIPNIIFGSFGMNLNGIPFSKSSQGFGLACGVTVILCIVCIIILKKKDLF
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 35723; Mature: 35723
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIYKNTEQDKTIKKLDNIEPGTWINIVSPSEQELIFVSKKTGVSLDFLKASLDEEETS CEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCCCCC RIDIEDNNMIVILDIPFTEMEDNSLTYDTYPLAIINTPNNIITVCLKNSKILTDFFNNKV EEEECCCCEEEEEECCCCCCCCCCEEEECEEEEEEECCCCEEEEEEECCEEEHHHHHHHH KSFYTFKRSRFILQILYRVASYFLLYLRQIDKKSVMIEKKLHKSMKNRELILLLSLEKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEEEECCCE VYFSTSLKANEITLEKMLKLDIIQRYPEDQDILEDVIIENKQAIEMANIYSNILSGTMDA EEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FASVISNNLNIVMKLLASITIVMSIPNIIFGSFGMNLNGIPFSKSSQGFGLACGVTVILC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IVCIIILKKKDLF HHHHHHHHHCCCC >Mature Secondary Structure MISIYKNTEQDKTIKKLDNIEPGTWINIVSPSEQELIFVSKKTGVSLDFLKASLDEEETS CEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCCCCC RIDIEDNNMIVILDIPFTEMEDNSLTYDTYPLAIINTPNNIITVCLKNSKILTDFFNNKV EEEECCCCEEEEEECCCCCCCCCCEEEECEEEEEEECCCCEEEEEEECCEEEHHHHHHHH KSFYTFKRSRFILQILYRVASYFLLYLRQIDKKSVMIEKKLHKSMKNRELILLLSLEKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEEEECCCE VYFSTSLKANEITLEKMLKLDIIQRYPEDQDILEDVIIENKQAIEMANIYSNILSGTMDA EEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FASVISNNLNIVMKLLASITIVMSIPNIIFGSFGMNLNGIPFSKSSQGFGLACGVTVILC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IVCIIILKKKDLF HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]