Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755746

Identifier: 170755746

GI number: 170755746

Start: 2825442

End: 2826101

Strand: Reverse

Name: 170755746

Synonym: CLD_1921

Alternate gene names: NA

Gene position: 2826101-2825442 (Counterclockwise)

Preceding gene: 170756332

Following gene: 170754752

Centisome position: 71.4

GC content: 23.94

Gene sequence:

>660_bases
TTGAATAATAAAGATGAATTTAAGATTAATAATAGGGTAGAAATAGAGTGGGAGGATGGTTATTATAAAAGTATTATACA
GGATGTAAATGAAGATACCATTTATATAAATATACCTGCTAATAAGGGTAAATATTTGCCACTAAACCATAATGATAAAG
TAACTGTTTTTTATTTTCATGGTGAAAAGATATTTAAGTTTAGAACTATAGTAACAGGAAGAAAAATAGATAAAATACTA
CTTATAGCTTTAAAAAAACCACAGAAAATGAATAGAATTCAAAGAAGAAATTTTGTAAGAATAAGTTTAATTTTAAATAC
TTATGCTGCACTAATAGATACTAAAAGAGATTTAAAAGAAATTTGTTATGCTAATAAATGCAATACTGAATTTGATTTTT
TTGATGCTGATATTGTAGATATAAGTGGTGGTGGATTAAAACTTTCCACTAAAAAGGATATAGATTTTGGAGAAGAGATT
ATAGTAAATATTCCTTTTGAGAAGGAAAATATGGCTATAAAGGGTAAAATAATTAGAAAGCAAAATGAAAAAGAAAAATA
TATTTATGGAGTTAAATTTTTAGACATAGATGTATTAACTAGAGAAAAAATAATAAAGTTTATTTTCTCTAAAATGAGAA
AACAAGTGCATAGGCTATAG

Upstream 100 bases:

>100_bases
AAAATATATTAGGTGATGTTAAGAGTTATAATGATAATGTGAGTGTAGAAGGATTTTTTAAAAAATTATTCAGTATATTT
TCTTAGGGGGATGAGTATTC

Downstream 100 bases:

>100_bases
AGGAGGATAGGTCATGGCAATAGCTGATAATAATTTATATGTTAAAGAAGAGATAGTAAAAAAATATATTCCTTTGGTTA
AATATATAGCCTCTAGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Flagellar Protein; Type IV Pilus Assembly Protein PilZ; Type Iv Pilus Assembly Pilz; Type Iv Pilus Assembly Protein Pilz; Glycosyltransferase; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNNKDEFKINNRVEIEWEDGYYKSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFHGEKIFKFRTIVTGRKIDKIL
LIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKEICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEI
IVNIPFEKENMAIKGKIIRKQNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL

Sequences:

>Translated_219_residues
MNNKDEFKINNRVEIEWEDGYYKSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFHGEKIFKFRTIVTGRKIDKIL
LIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKEICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEI
IVNIPFEKENMAIKGKIIRKQNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL
>Mature_219_residues
MNNKDEFKINNRVEIEWEDGYYKSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFHGEKIFKFRTIVTGRKIDKIL
LIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKEICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEI
IVNIPFEKENMAIKGKIIRKQNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL

Specific function: Unknown

COG id: COG5581

COG function: function code M; Predicted glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25939; Mature: 25939

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKDEFKINNRVEIEWEDGYYKSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFH
CCCCCCEEECCEEEEEECCCHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCEEEEEEEE
GEKIFKFRTIVTGRKIDKILLIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKE
CCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHCCEEEEEEHHHHHHHHHCCHHHHHH
ICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEIIVNIPFEKENMAIKGKIIRK
HHHCCCCCCCCCEECCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEC
QNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL
CCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNKDEFKINNRVEIEWEDGYYKSIIQDVNEDTIYINIPANKGKYLPLNHNDKVTVFYFH
CCCCCCEEECCEEEEEECCCHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCEEEEEEEE
GEKIFKFRTIVTGRKIDKILLIALKKPQKMNRIQRRNFVRISLILNTYAALIDTKRDLKE
CCEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHCCEEEEEEHHHHHHHHHCCHHHHHH
ICYANKCNTEFDFFDADIVDISGGGLKLSTKKDIDFGEEIIVNIPFEKENMAIKGKIIRK
HHHCCCCCCCCCEECCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEC
QNEKEKYIYGVKFLDIDVLTREKIIKFIFSKMRKQVHRL
CCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA