| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yiaH [C]
Identifier: 170755734
GI number: 170755734
Start: 481992
End: 482981
Strand: Reverse
Name: yiaH [C]
Synonym: CLD_0367
Alternate gene names: 170755734
Gene position: 482981-481992 (Counterclockwise)
Preceding gene: 170754929
Following gene: 170754617
Centisome position: 12.2
GC content: 21.01
Gene sequence:
>990_bases ATGGATCTATTAAGAGCTTTATCTACCATAGCAGTTATATTGATTCATGTAACAGGTACTATATTATATAATAGCAATAG TAAAAGTTTAACTTATAATTCTTCCCTTGTTTTAAACCAGTTAACAAGATTTTCAGTACCTGCTTTTATATTTTTATCTG GTTTTGGACTAGCCCTAAGCTATAAAAAGGAAAGTAAATACTTAACCTATTTAGGCCATAGACTAAAAAAAGTAGTTCCA GACTACTTTGCATGGTATATTGTATATATTTTTCTATTAGAAGATATAAACCTAAGTTATCATGATAAAATAATTAGCAT TTTTCATGGGACACTATACTATCACTTTTATTTTGTTCCTATAATAATTATATTATATTTAATATTTCCTATATTTTATA ATTTTTTTAGAACTAAATTAGCATTATTTATTACCTTTTTTCTAAATATGGGAGTATATATATTACTTAGATACCCTAAT ATACCTAAAAGTATTAGTGAAAATTTAACTAGAGAAAGTGTAATTAGTTGGATATTTTATTTTGTTTTAGGGGTTTATTT TTGTAGTAATTATGATAAAGTACATATCTTTATAAAAAAACATAGAAACAAATTACTTTTTCTATTGTTATTATCTACAT ATATATTATTAAAGGATACATTTTTATGTTTAAGAGCAAATAATGATTTAGATTACGGAACAACTTTTATAAGACCTTCT GTTATGTTATTTAGTATATTTTTCATATTATACATAATGAGTTTCAATTTTAATAATTTAAGTTTTAAAAAAATATTCTA TATGATATCAAAACATTCCTATACAATATATTTATCCCATCCTTTATTACTCTATTGGTTAAAAAAATATTATATTGAAA ATAAATATATAATAGGAAGCTATAAATTCTTTATAATTGTTTTTTTTACTTGTTTTATTGGAGGTCTCTCAATATCAATA TTAATAAATAAATTTAAAAAATTATTATAA
Upstream 100 bases:
>100_bases ACAAAGAATATTAGTAAATATTTTTTATTTTTGATATAATAATATTTGAAAATTTACATTGAGGGAGGTAATAAAAATAA AGAACAAAAGAATTGCATCT
Downstream 100 bases:
>100_bases AACATGGGCAGATACAATTTTTGTATCTGCCCTTTAGTATTCCCCTTAGTTACCTCTTATTTTTTAATAATATAGACATC TTTAGTTAATTGGTCCATTG
Product: acyltransferase family protein
Products: NA
Alternate protein names: Acyltransferase
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MDLLRALSTIAVILIHVTGTILYNSNSKSLTYNSSLVLNQLTRFSVPAFIFLSGFGLALSYKKESKYLTYLGHRLKKVVP DYFAWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFFLNMGVYILLRYPN IPKSISENLTRESVISWIFYFVLGVYFCSNYDKVHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRANNDLDYGTTFIRPS VMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFIIVFFTCFIGGLSISI LINKFKKLL
Sequences:
>Translated_329_residues MDLLRALSTIAVILIHVTGTILYNSNSKSLTYNSSLVLNQLTRFSVPAFIFLSGFGLALSYKKESKYLTYLGHRLKKVVP DYFAWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFFLNMGVYILLRYPN IPKSISENLTRESVISWIFYFVLGVYFCSNYDKVHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRANNDLDYGTTFIRPS VMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFIIVFFTCFIGGLSISI LINKFKKLL >Mature_329_residues MDLLRALSTIAVILIHVTGTILYNSNSKSLTYNSSLVLNQLTRFSVPAFIFLSGFGLALSYKKESKYLTYLGHRLKKVVP DYFAWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFFLNMGVYILLRYPN IPKSISENLTRESVISWIFYFVLGVYFCSNYDKVHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRANNDLDYGTTFIRPS VMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFIIVFFTCFIGGLSISI LINKFKKLL
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39169; Mature: 39169
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLRALSTIAVILIHVTGTILYNSNSKSLTYNSSLVLNQLTRFSVPAFIFLSGFGLALS CHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCHHHHHHHHHHCCCHHHHHHCCCCEEE YKKESKYLTYLGHRLKKVVPDYFAWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVP ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IIIILYLIFPIFYNFFRTKLALFITFFLNMGVYILLRYPNIPKSISENLTRESVISWIFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH FVLGVYFCSNYDKVHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRANNDLDYGTTFIRPS HHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHH VMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEEH YKFFIIVFFTCFIGGLSISILINKFKKLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDLLRALSTIAVILIHVTGTILYNSNSKSLTYNSSLVLNQLTRFSVPAFIFLSGFGLALS CHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCHHHHHHHHHHCCCHHHHHHCCCCEEE YKKESKYLTYLGHRLKKVVPDYFAWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVP ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IIIILYLIFPIFYNFFRTKLALFITFFLNMGVYILLRYPNIPKSISENLTRESVISWIFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH FVLGVYFCSNYDKVHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRANNDLDYGTTFIRPS HHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHH VMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEEH YKFFIIVFFTCFIGGLSISILINKFKKLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA