The gene/protein map for NC_010516 is currently unavailable.
Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is ygfJ [H]

Identifier: 170755723

GI number: 170755723

Start: 3050354

End: 3050923

Strand: Reverse

Name: ygfJ [H]

Synonym: CLD_1721

Alternate gene names: 170755723

Gene position: 3050923-3050354 (Counterclockwise)

Preceding gene: 170756800

Following gene: 170755557

Centisome position: 77.08

GC content: 28.07

Gene sequence:

>570_bases
ATGAGCGTTGATGGTATAGTACTAGCAGCAGGGTTGTCTTCACGGGTAGGAAGATATAAATTAGCATTGGATATACAAGG
AAAAACAGTTATAGAAAGATGTATAGAATCCATGTATGATATTTGTTCTAATGTAATAGTTGTTGGCGGACATAATTATA
ATTTACTTCAAGATATATTAAAGCCATACGCTAAAGTAAAGATGATTTTAAATGAAAATTATATTGAAGGTATGTTTACC
TCTGTAAAAAAGGGATTATATCAAGTAGAGGAAGATAAATTTTTTTTAATTCCAGCGGATTATCCACTAATAAAAAAAGA
GACCTATATAAAAATGCTTTCCACTAATGGTGATATAGTTATACCAACCTATAAAAATATAAAAGGTCATCCAGTACTTA
TAAAAAGACGTATTATTAATAATATTTTATCAGGAGGATACGATAGCTTGAGAGAATTTATAAATGAGAATGGTTTTTCT
ACTTTATGTATAGAAGATGAAGGTGTACTATTAGATATAGATACCGACCAAGATTATATTGATATACTGAATAGAACTAA
GTTTTATTAA

Upstream 100 bases:

>100_bases
GTGCCATAAGCTTCTAACATATGTAGTTAGTCCAAAGGACAATATCTTCAGATATTAGTTGATAAAATAGATATAAGCAA
ATTCAGAAGGAAGTGATATT

Downstream 100 bases:

>100_bases
TAATCATTATAACTGCTATTCTTCCTGATTCATAGTGATGTTTAGTGTAGTGATATCTCTCTAAAAACATGTTCAACATC
ATCAAGGTCTTAAAGACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDILKPYAKVKMILNENYIEGMFT
SVKKGLYQVEEDKFFLIPADYPLIKKETYIKMLSTNGDIVIPTYKNIKGHPVLIKRRIINNILSGGYDSLREFINENGFS
TLCIEDEGVLLDIDTDQDYIDILNRTKFY

Sequences:

>Translated_189_residues
MSVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDILKPYAKVKMILNENYIEGMFT
SVKKGLYQVEEDKFFLIPADYPLIKKETYIKMLSTNGDIVIPTYKNIKGHPVLIKRRIINNILSGGYDSLREFINENGFS
TLCIEDEGVLLDIDTDQDYIDILNRTKFY
>Mature_188_residues
SVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDILKPYAKVKMILNENYIEGMFTS
VKKGLYQVEEDKFFLIPADYPLIKKETYIKMLSTNGDIVIPTYKNIKGHPVLIKRRIINNILSGGYDSLREFINENGFST
LCIEDEGVLLDIDTDQDYIDILNRTKFY

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789242, Length=186, Percent_Identity=29.5698924731183, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017696 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21502; Mature: 21371

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDIL
CCCCCEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH
KPYAKVKMILNENYIEGMFTSVKKGLYQVEEDKFFLIPADYPLIKKETYIKMLSTNGDIV
HHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHEEEEEECCCCEE
IPTYKNIKGHPVLIKRRIINNILSGGYDSLREFINENGFSTLCIEDEGVLLDIDTDQDYI
EECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEEECCCCHHH
DILNRTKFY
HHHHHCCCC
>Mature Secondary Structure 
SVDGIVLAAGLSSRVGRYKLALDIQGKTVIERCIESMYDICSNVIVVGGHNYNLLQDIL
CCCCEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH
KPYAKVKMILNENYIEGMFTSVKKGLYQVEEDKFFLIPADYPLIKKETYIKMLSTNGDIV
HHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHEEEEEECCCCEE
IPTYKNIKGHPVLIKRRIINNILSGGYDSLREFINENGFSTLCIEDEGVLLDIDTDQDYI
EECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEEECCCCHHH
DILNRTKFY
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]