Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755653

Identifier: 170755653

GI number: 170755653

Start: 3375275

End: 3376108

Strand: Reverse

Name: 170755653

Synonym: CLD_1422

Alternate gene names: NA

Gene position: 3376108-3375275 (Counterclockwise)

Preceding gene: 170755154

Following gene: 170757176

Centisome position: 85.29

GC content: 20.5

Gene sequence:

>834_bases
ATGTTTAAATATTCTAAAGCAGATGAAGTTTTAAAGGGAAAACTTAGTTCATATACAAATAAAGGAGAATATTTATTAGT
CTCAGATGTTATAAAATATAACCAAATAGAATATAGAGAAGTATTGTTTAATAAGAAAAATTTATTAATAGAAGAAGTTA
AAGGTATAGGCTATATAGATGAAAACAATAATATTGTACAAGATAAGAATATACAAAAATCATTGGCTACATTAGCCTAT
TACTATGAGATATTTTTTTGTATAAATAAAAAAAATAATATATTTAAAGCTTTAAGAAGTGAAGAGGATTTACATAAGGA
AAACGAAGATATAGAATTATCTATAAAAGCACTAGAATTTTTGCAAAAGGAAAAGGTAAAGGATATAGAAAAAGTGAAAA
ATATACTATTAGAGCTACCAAGTTTAAGAAAAAAAACTAATGATTTATTAAAAGGAATGAAATCAATAATAGAAAATATA
TTTAATGAAGAAGACACTATGTCTAAAGAAAGCTTTAAAAAAGTATATACAATTTATAAAGAAATACTAAAACTGAATTT
TAAAAATGTAAAATTAATATATTCAGGAATAGATTATTATGATTATATAAAAGGCTGTATAAATAAAAAAAGAAAATCTT
TTTCTATAAGATTTAATAAAAAAATATCAGATCCCTTATTTAAATTAGATTACCAGATAAACTATTTTAAAAAATTGCTA
AAAACTTATAATGAAATATTATGTATGAATGAAAGAGAGTATCTAAAGTTTATATACAATTCAGAGAAAGAAAATATAAA
TGAAAGATTATATCTTGTGAGAGCAAAAAACTAG

Upstream 100 bases:

>100_bases
TTATAAAGCATCTAATATATAATATGTAATTTATAATAAATTTAAAAAAATCTAGTATAATTATAATAATATTTGAATTA
AAAAGTGTTGGGGTGTTAAG

Downstream 100 bases:

>100_bases
AATTTTATTCATAAAATATGCTATTTAAACATTAAGTTCTACTGTTGACATAAATAATATAAAAAATAAAATCTATGAAA
TTAAAGCGTTAAGCACATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MFKYSKADEVLKGKLSSYTNKGEYLLVSDVIKYNQIEYREVLFNKKNLLIEEVKGIGYIDENNNIVQDKNIQKSLATLAY
YYEIFFCINKKNNIFKALRSEEDLHKENEDIELSIKALEFLQKEKVKDIEKVKNILLELPSLRKKTNDLLKGMKSIIENI
FNEEDTMSKESFKKVYTIYKEILKLNFKNVKLIYSGIDYYDYIKGCINKKRKSFSIRFNKKISDPLFKLDYQINYFKKLL
KTYNEILCMNEREYLKFIYNSEKENINERLYLVRAKN

Sequences:

>Translated_277_residues
MFKYSKADEVLKGKLSSYTNKGEYLLVSDVIKYNQIEYREVLFNKKNLLIEEVKGIGYIDENNNIVQDKNIQKSLATLAY
YYEIFFCINKKNNIFKALRSEEDLHKENEDIELSIKALEFLQKEKVKDIEKVKNILLELPSLRKKTNDLLKGMKSIIENI
FNEEDTMSKESFKKVYTIYKEILKLNFKNVKLIYSGIDYYDYIKGCINKKRKSFSIRFNKKISDPLFKLDYQINYFKKLL
KTYNEILCMNEREYLKFIYNSEKENINERLYLVRAKN
>Mature_277_residues
MFKYSKADEVLKGKLSSYTNKGEYLLVSDVIKYNQIEYREVLFNKKNLLIEEVKGIGYIDENNNIVQDKNIQKSLATLAY
YYEIFFCINKKNNIFKALRSEEDLHKENEDIELSIKALEFLQKEKVKDIEKVKNILLELPSLRKKTNDLLKGMKSIIENI
FNEEDTMSKESFKKVYTIYKEILKLNFKNVKLIYSGIDYYDYIKGCINKKRKSFSIRFNKKISDPLFKLDYQINYFKKLL
KTYNEILCMNEREYLKFIYNSEKENINERLYLVRAKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33227; Mature: 33227

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKYSKADEVLKGKLSSYTNKGEYLLVSDVIKYNQIEYREVLFNKKNLLIEEVKGIGYID
CCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCHHHHHHHHCCHHHHHHHHCCCEEEE
ENNNIVQDKNIQKSLATLAYYYEIFFCINKKNNIFKALRSEEDLHKENEDIELSIKALEF
CCCCEECCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCHHHHHCCCCCCEEHHHHHHH
LQKEKVKDIEKVKNILLELPSLRKKTNDLLKGMKSIIENIFNEEDTMSKESFKKVYTIYK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
EILKLNFKNVKLIYSGIDYYDYIKGCINKKRKSFSIRFNKKISDPLFKLDYQINYFKKLL
HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHCCCHHHHHHHH
KTYNEILCMNEREYLKFIYNSEKENINERLYLVRAKN
HHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MFKYSKADEVLKGKLSSYTNKGEYLLVSDVIKYNQIEYREVLFNKKNLLIEEVKGIGYID
CCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCHHHHHHHHCCHHHHHHHHCCCEEEE
ENNNIVQDKNIQKSLATLAYYYEIFFCINKKNNIFKALRSEEDLHKENEDIELSIKALEF
CCCCEECCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCHHHHHCCCCCCEEHHHHHHH
LQKEKVKDIEKVKNILLELPSLRKKTNDLLKGMKSIIENIFNEEDTMSKESFKKVYTIYK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
EILKLNFKNVKLIYSGIDYYDYIKGCINKKRKSFSIRFNKKISDPLFKLDYQINYFKKLL
HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHCCCHHHHHHHH
KTYNEILCMNEREYLKFIYNSEKENINERLYLVRAKN
HHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA