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The map label for this gene is yobV [H]

Identifier: 170755639

GI number: 170755639

Start: 853895

End: 854824

Strand: Direct

Name: yobV [H]

Synonym: CLD_0030

Alternate gene names: 170755639

Gene position: 853895-854824 (Clockwise)

Preceding gene: 170756888

Following gene: 170756706

Centisome position: 21.57

GC content: 26.24

Gene sequence:

>930_bases
ATGAAGATTGAAAGGTTATTAGGAATATTATTTTATATAATAAATAGAGATAATGTTAGTGCAAATAATTTAGCTGAGCA
TTTTAATGTTTCTCGAAGAACAATTCTTCGTGATATAAATACGTTGACGTTAGCAGGGATTCCAATTTATTCTGAAATAG
GGGCCAAAGGTGGCTATTCAATTAATCCTGATTATAAGTTGAATGAGAAAATAATTGATAATGCCAACTCTGAATATATG
CTACTTGCGCTGCAAAGCTTGAAAAGTGTTTATGGTGAAAAGAAAGTTCATGAAACATATGAAAAAGTAAAACATATATA
TTCTGATAAAAATAATAATCATGCACTAAATATTGATTTTTCTATAGTAAATGAGAACAGAAGTATAATTTCCTATATTT
CTATGTTAAAAGAAGCCATTCAACATAATAAAACAGTTTCATTTCAATACACTAATCTTAATGGTGATACTCGAATAGTT
AAATGCAATATTATACATGTTTTATATAAATGGTACTCTTGGTATGCTTTTGGTTATGATTTAGAGAAAAGTGATTTTCG
CATGTTTAAGATAGTAAGAATGAGAAATTTAGAAATAAGTGAGGCGTATTTTGATAATGATTATGATGTAGCAAAGTTAC
TTGATAATTATGAAGAAAAAAGAGATAAGGATAATATATATGTTACTATTAAATATTCAAAAGAAGTGGAGGCTTTGATT
AATGAATATTTTCATGGTGATGTTATCAATGTATCAGAAACATCTATAGTTAAAAAAGCTACTATAAAAGAAAATGACTT
TATTATGTTTTCTATCATTTTAGGGTTTGGAGAAAAAATTAAAGTTCTTTCCCCTTTATCCTACCAGCAAAGAATTAAAG
AACATTTGAAAAATACTTTAATAAAAAATTATGAGAACAGTGACATATAG

Upstream 100 bases:

>100_bases
CTATATTGGGGATTATGGGTTTTATATTTATTTACTGAAATTTGTTGCTATTTGTCCAGTAGCACTATAGAATCTATATA
TATTAAATCGAGGTGAGATG

Downstream 100 bases:

>100_bases
GTGTCACTGTTTTTGTGTTAGAATGTTTTTAAATTAAGGTTTGTGCTAAGTAATTATGAAAAAATAGCTTTAAAAATCAT
ACAATCAATTTTAGGAGGAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKIERLLGILFYIINRDNVSANNLAEHFNVSRRTILRDINTLTLAGIPIYSEIGAKGGYSINPDYKLNEKIIDNANSEYM
LLALQSLKSVYGEKKVHETYEKVKHIYSDKNNNHALNIDFSIVNENRSIISYISMLKEAIQHNKTVSFQYTNLNGDTRIV
KCNIIHVLYKWYSWYAFGYDLEKSDFRMFKIVRMRNLEISEAYFDNDYDVAKLLDNYEEKRDKDNIYVTIKYSKEVEALI
NEYFHGDVINVSETSIVKKATIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTLIKNYENSDI

Sequences:

>Translated_309_residues
MKIERLLGILFYIINRDNVSANNLAEHFNVSRRTILRDINTLTLAGIPIYSEIGAKGGYSINPDYKLNEKIIDNANSEYM
LLALQSLKSVYGEKKVHETYEKVKHIYSDKNNNHALNIDFSIVNENRSIISYISMLKEAIQHNKTVSFQYTNLNGDTRIV
KCNIIHVLYKWYSWYAFGYDLEKSDFRMFKIVRMRNLEISEAYFDNDYDVAKLLDNYEEKRDKDNIYVTIKYSKEVEALI
NEYFHGDVINVSETSIVKKATIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTLIKNYENSDI
>Mature_309_residues
MKIERLLGILFYIINRDNVSANNLAEHFNVSRRTILRDINTLTLAGIPIYSEIGAKGGYSINPDYKLNEKIIDNANSEYM
LLALQSLKSVYGEKKVHETYEKVKHIYSDKNNNHALNIDFSIVNENRSIISYISMLKEAIQHNKTVSFQYTNLNGDTRIV
KCNIIHVLYKWYSWYAFGYDLEKSDFRMFKIVRMRNLEISEAYFDNDYDVAKLLDNYEEKRDKDNIYVTIKYSKEVEALI
NEYFHGDVINVSETSIVKKATIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTLIKNYENSDI

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36203; Mature: 36203

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIERLLGILFYIINRDNVSANNLAEHFNVSRRTILRDINTLTLAGIPIYSEIGAKGGYS
CCHHHHHHHHHHEECCCCCCHHHHHHHHCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCC
INPDYKLNEKIIDNANSEYMLLALQSLKSVYGEKKVHETYEKVKHIYSDKNNNHALNIDF
CCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
SIVNENRSIISYISMLKEAIQHNKTVSFQYTNLNGDTRIVKCNIIHVLYKWYSWYAFGYD
EEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCC
LEKSDFRMFKIVRMRNLEISEAYFDNDYDVAKLLDNYEEKRDKDNIYVTIKYSKEVEALI
CCCCCHHHHHHHHHHCCEEHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHH
NEYFHGDVINVSETSIVKKATIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTL
HHHHCCCEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHH
IKNYENSDI
HHCCCCCCC
>Mature Secondary Structure
MKIERLLGILFYIINRDNVSANNLAEHFNVSRRTILRDINTLTLAGIPIYSEIGAKGGYS
CCHHHHHHHHHHEECCCCCCHHHHHHHHCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCC
INPDYKLNEKIIDNANSEYMLLALQSLKSVYGEKKVHETYEKVKHIYSDKNNNHALNIDF
CCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
SIVNENRSIISYISMLKEAIQHNKTVSFQYTNLNGDTRIVKCNIIHVLYKWYSWYAFGYD
EEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCC
LEKSDFRMFKIVRMRNLEISEAYFDNDYDVAKLLDNYEEKRDKDNIYVTIKYSKEVEALI
CCCCCHHHHHHHHHHCCEEHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHH
NEYFHGDVINVSETSIVKKATIKENDFIMFSIILGFGEKIKVLSPLSYQQRIKEHLKNTL
HHHHCCCEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHH
IKNYENSDI
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]