Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is dipZ [H]

Identifier: 170755613

GI number: 170755613

Start: 2941856

End: 2943259

Strand: Reverse

Name: dipZ [H]

Synonym: CLD_1808

Alternate gene names: 170755613

Gene position: 2943259-2941856 (Counterclockwise)

Preceding gene: 170756689

Following gene: 170755730

Centisome position: 74.36

GC content: 28.13

Gene sequence:

>1404_bases
ATGAGTAATTTGTATGAAAAGTATAAAAATGCTAGAGTTCATGCCCCTAATTTCCCAATGACTATTGAGTGGCTAGGTGC
CAAGAGGACAAATTTGGATAAACTAAAAAATAGAGTTATACTTTTAGATTTTTGGACTTTTTGTTGTATAAATTGCATAC
ATGTAATAGAGGATCTAAAATATTTAGAAGAAAAATATAAGAATAAGTTACAGGTCATAGGAGTACATTCTCCTAAATTT
AAATACGAAAAGAACAGTAAAGCAATACTAAATGCTATGAAAAAATATGGAATAAATCATCCAGTAGTAAATGATAAAAA
TAAAAGCATATGGGATAGCTATACAGTAAATGCATGGCCAACATTTATATTAATAGATCCAGAGGGATATGCTTTTACTA
TGGTATCAGGAGAAGGTAATAGAGAACTATTGGACCAAATAATAGGTGATACAATAGAATACTTTGATAATATAAATTGG
CCAGATGAAAATATAATTTTAGAAAATAAATGCGAAAAAGAAGAATATATGTATCCATCTAAAATATCCATAAATGAAGA
TGGATTAATAGCCTTTTCAGAAAAAGGTAAAAATAGAATAGTAATATTAGACCAAAACTTAGAAAAAATAAAAACAATAG
GCAGTAGTAAATATGGATTAAAAGACGGAGATTTTAAAGAGGCTCAATTTAAAGCTCCAGAGGGGTTAAGATTTATAGAA
AATAAGATCTATGTTGCAGATACTGAAAACCATTTCATAAGGGAATGCGATTTGGAAAAGGAAATAGTTAAAACTATAGC
AGGTAATGGACAAAAGGAATATAGTCCTATGGCAAAGGGGGATGCTTTAAATGTAAGCTTAAATTCTCCTTGGGATCTAG
AAATATTAAAAGACTGTATATATATAGCTATGGCAGGAAATCATCAAATATGGAAATACAATATGAAAGATAAAAGTATA
GAAAGTCATATAGGTACAGGGGGAGAAAACATAAGGGATGGAAGTTTTGATAAATGCTTATTAGCACAGACTTCAGCTTT
ATGCTATGATGGTAAGAAAAAATTATATTTTGTAGATTCAGAAACAAGTTCTATAAGATATGCAGATTTAGAAGAGAATA
AAGTCCATACACTTATAGGGAAAGGATTGTTTTATTTTGGAAACAAGGTAGGAAGTTTTGAAAATACCATGCTTCAACAT
CCTTTAGATTTAAAATATAAAGACAATATATTATATATAGCAGACACCTATAACAATAGAATAGTAAAAGCAGACATTTT
AAATAAAAAAGTAGAAATAATAAAAAGAGGATTAAATGAGCCAAATGGAATAGCAATATATGAAGATAGTATATATATAT
GTAATACAAACGATGGTAAAATCGAAAAAATAAGCATAAAATAA

Upstream 100 bases:

>100_bases
AAAGAATGTGAAAATAAATATATATATAATAATATACTATATAATAAGAATGAGGAAATTTGAGAGGAGGGAATAAGGAT
AGGATTATCCTTATAAATAT

Downstream 100 bases:

>100_bases
TGGGTTGTCTCAAAAATAGATTTAATTTTAATATAGTAAATATAAAAAAATACATGCAATAAGCATATGAATAAGCTTTA
GTAGTTCTTAATTTGACGTA

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKNKLQVIGVHSPKF
KYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFTMVSGEGNRELLDQIIGDTIEYFDNINW
PDENIILENKCEKEEYMYPSKISINEDGLIAFSEKGKNRIVILDQNLEKIKTIGSSKYGLKDGDFKEAQFKAPEGLRFIE
NKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCIYIAMAGNHQIWKYNMKDKSI
ESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDSETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQH
PLDLKYKDNILYIADTYNNRIVKADILNKKVEIIKRGLNEPNGIAIYEDSIYICNTNDGKIEKISIK

Sequences:

>Translated_467_residues
MSNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKNKLQVIGVHSPKF
KYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFTMVSGEGNRELLDQIIGDTIEYFDNINW
PDENIILENKCEKEEYMYPSKISINEDGLIAFSEKGKNRIVILDQNLEKIKTIGSSKYGLKDGDFKEAQFKAPEGLRFIE
NKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCIYIAMAGNHQIWKYNMKDKSI
ESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDSETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQH
PLDLKYKDNILYIADTYNNRIVKADILNKKVEIIKRGLNEPNGIAIYEDSIYICNTNDGKIEKISIK
>Mature_466_residues
SNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKNRVILLDFWTFCCINCIHVIEDLKYLEEKYKNKLQVIGVHSPKFK
YEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWPTFILIDPEGYAFTMVSGEGNRELLDQIIGDTIEYFDNINWP
DENIILENKCEKEEYMYPSKISINEDGLIAFSEKGKNRIVILDQNLEKIKTIGSSKYGLKDGDFKEAQFKAPEGLRFIEN
KIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCIYIAMAGNHQIWKYNMKDKSIE
SHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDSETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQHP
LDLKYKDNILYIADTYNNRIVKADILNKKVEIIKRGLNEPNGIAIYEDSIYICNTNDGKIEKISIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42476013, Length=512, Percent_Identity=32.421875, Blast_Score=259, Evalue=4e-69,
Organism=Drosophila melanogaster, GI116007528, Length=504, Percent_Identity=33.1349206349206, Blast_Score=267, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR003834
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 53724; Mature: 53593

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKNRVILLDFWTFCCINCIHVIEDLK
CCHHHHHHHCCEEECCCCCEEEEECCCCCCCHHHHHCCEEEEEHHHHHHHHHHHHHHHHH
YLEEKYKNKLQVIGVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWP
HHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCE
TFILIDPEGYAFTMVSGEGNRELLDQIIGDTIEYFDNINWPDENIILENKCEKEEYMYPS
EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHCCCCC
KISINEDGLIAFSEKGKNRIVILDQNLEKIKTIGSSKYGLKDGDFKEAQFKAPEGLRFIE
EEEECCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEC
NKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCI
CEEEEEECCCCHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCCCCCHHHHHCEE
YIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDS
EEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCEEEEEEEC
ETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQHPLDLKYKDNILYIADTYNNR
CCCCEEEECCCCCCCHHHHHCCHHHHCCCCCCHHHHHHCCCCCCEECCCEEEEEECCCCE
IVKADILNKKVEIIKRGLNEPNGIAIYEDSIYICNTNDGKIEKISIK
EEEHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEEEEEC
>Mature Secondary Structure 
SNLYEKYKNARVHAPNFPMTIEWLGAKRTNLDKLKNRVILLDFWTFCCINCIHVIEDLK
CHHHHHHHCCEEECCCCCEEEEECCCCCCCHHHHHCCEEEEEHHHHHHHHHHHHHHHHH
YLEEKYKNKLQVIGVHSPKFKYEKNSKAILNAMKKYGINHPVVNDKNKSIWDSYTVNAWP
HHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCE
TFILIDPEGYAFTMVSGEGNRELLDQIIGDTIEYFDNINWPDENIILENKCEKEEYMYPS
EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHCCCCC
KISINEDGLIAFSEKGKNRIVILDQNLEKIKTIGSSKYGLKDGDFKEAQFKAPEGLRFIE
EEEECCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEC
NKIYVADTENHFIRECDLEKEIVKTIAGNGQKEYSPMAKGDALNVSLNSPWDLEILKDCI
CEEEEEECCCCHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCCCCCHHHHHCEE
YIAMAGNHQIWKYNMKDKSIESHIGTGGENIRDGSFDKCLLAQTSALCYDGKKKLYFVDS
EEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCEEEEEEEC
ETSSIRYADLEENKVHTLIGKGLFYFGNKVGSFENTMLQHPLDLKYKDNILYIADTYNNR
CCCCEEEECCCCCCCHHHHHCCHHHHCCCCCCHHHHHHCCCCCCEECCCEEEEEECCCCE
IVKADILNKKVEIIKRGLNEPNGIAIYEDSIYICNTNDGKIEKISIK
EEEHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]