| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755604
Identifier: 170755604
GI number: 170755604
Start: 2794038
End: 2794739
Strand: Reverse
Name: 170755604
Synonym: CLD_1951
Alternate gene names: NA
Gene position: 2794739-2794038 (Counterclockwise)
Preceding gene: 170754842
Following gene: 170754776
Centisome position: 70.61
GC content: 27.49
Gene sequence:
>702_bases ATGAATGCACTTATAATAATGACTAGGATACCTGTACCTTATAAGACTAAAACTAGGCTTATGAAAATATTGACAGGGCA GCAGTGTGCAGATATACATAAATGCTTTTTAAAGGATGTATTTAATATGTGTAAATCCTTAAAAGAGAGTATGGATATAT ATGTAACCTACGGTGATGAAGGTGGCTTTAGTATAATAGAACCTTTAGTACCAAGTTTTGCTAGAGTTTTCCCCCAAAAC GGCAAAGATATAGGACAAAGAATGGAAAATGCTGTAGGTGAGGTTTTAAAAAAAGGTTATGAAAAAGTTGTTTTAATAGG ATCTGATATACCAGAGATTCAGATCAAGGATATATTAAGGGCTTTTGATATTTTAGAATATAAAGATTTATGTTTTGGAC CTACATTTGATGGAGGTTATTATCTTGTAGGTATGAAAAAATTAAATAAAATAGTTTTTAAAAAGGATATAAAATGGGGA GATAAATCTGTATTTTATAGTACTATGGATTTATTAAATAAAGAAAATTTAACAGTAGATTTTACAGAAAAATATGAAGA TATAGACACAAAGGAAGATCTTAAAAACTTGATTTATAGATTAAATTGTAAATTATATAAGTATGATATTATACCTAAAA ATACTAAGAAGTATTTAGAAAATTGGTGGAGAGATGAAGATGCTGAAAGATATGTTGATTAA
Upstream 100 bases:
>100_bases GCCAATTTAAAACACATATTCTAATGCATAAATTAAGAATTTTATATTTTATGGGAGTACCTACAGAAAAATTAAATAAA ATATATCGGGAGGAAAGGTA
Downstream 100 bases:
>100_bases AGAAATAAGAGAATATGTTTATCATAAAAATTTGTTTAAAATAATAAATTTAAGTAAAAGTTTTAATGTTAGATTTTTAG CACAGGGTGAATATAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNALIIMTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSIIEPLVPSFARVFPQN GKDIGQRMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWG DKSVFYSTMDLLNKENLTVDFTEKYEDIDTKEDLKNLIYRLNCKLYKYDIIPKNTKKYLENWWRDEDAERYVD
Sequences:
>Translated_233_residues MNALIIMTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSIIEPLVPSFARVFPQN GKDIGQRMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWG DKSVFYSTMDLLNKENLTVDFTEKYEDIDTKEDLKNLIYRLNCKLYKYDIIPKNTKKYLENWWRDEDAERYVD >Mature_233_residues MNALIIMTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSIIEPLVPSFARVFPQN GKDIGQRMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWG DKSVFYSTMDLLNKENLTVDFTEKYEDIDTKEDLKNLIYRLNCKLYKYDIIPKNTKKYLENWWRDEDAERYVD
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27263; Mature: 27263
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALIIMTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDE CCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC GGFSIIEPLVPSFARVFPQNGKDIGQRMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILR CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH AFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWGDKSVFYSTMDLLNKENLTVD HHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEE FTEKYEDIDTKEDLKNLIYRLNCKLYKYDIIPKNTKKYLENWWRDEDAERYVD HHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MNALIIMTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDE CCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC GGFSIIEPLVPSFARVFPQNGKDIGQRMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILR CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH AFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWGDKSVFYSTMDLLNKENLTVD HHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEE FTEKYEDIDTKEDLKNLIYRLNCKLYKYDIIPKNTKKYLENWWRDEDAERYVD HHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA