| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755583
Identifier: 170755583
GI number: 170755583
Start: 1184240
End: 1184824
Strand: Direct
Name: 170755583
Synonym: CLD_3498
Alternate gene names: NA
Gene position: 1184240-1184824 (Clockwise)
Preceding gene: 170754824
Following gene: 170757332
Centisome position: 29.92
GC content: 23.93
Gene sequence:
>585_bases ATGGAGAAACAAGAATATTATATAGACCTGAATAATAAAGTAGAAAAGATGCTTAGAAAAGGTGAATTTTTAGGTAGTGG CCACAATGGCATAGTATATTTATTACCAGACAAAAAAGTAATCAAAATCTTTAAAGAAAAAAAGGTATGTAAAAAAGAAA GAGAAATTTTACAAAAAACTAATAACAGTAAATATTTTCCTAAAGTATATGATTATGGGGACTACTTTATATTAAGGGAG TACATAAGGGGAGAAAGATTAGATCACTATATAAAACAAAATGGGATTAACAAAAGATTAACTCATAATATAATTAAACT TATAAAAGAGTTTGAAAGATTAAAGTTCAAAAAATTAGATATAAGATGCAAAGATATTTATGTAGATAAGAAATGCAAAT TAAGAATAATAGATCCTAAAAATAATTATTCTAAAACTGTTGTATATCCAAGACATTTAATGAAAGGTTTAAATAAGCTT AAAGTATTAGATGATTTTTTCATTCAGGTTGAAAAGGAAGAACGTAAATATTATAATTTGTGGAGTACTAGAATGAAAGA CTACTTAGAAAAAGGAATAAAATAA
Upstream 100 bases:
>100_bases TAATAACACAGTAGTGCTAAAGGTCAAATAGGAACTTTAGCACTATTTTATATTATACTCATATAATGACTATAAAGAGA TTAATATATAAGAGGGAGTT
Downstream 100 bases:
>100_bases GGAAATTACAACTTAAAAGGTAGTTTACCTGCGGCCTATTAAAAAGGGATATGTGGCGAGAGCGGCAAATCAATTTGCTA AGAGACTCTAATTTGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Kinase-Like Protein; MAP/Microtubule Affinity-Regulating Kinase 3 RBAM; Serine/Threonine Kinase; Serine/Threonine Kinase-Like
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MEKQEYYIDLNNKVEKMLRKGEFLGSGHNGIVYLLPDKKVIKIFKEKKVCKKEREILQKTNNSKYFPKVYDYGDYFILRE YIRGERLDHYIKQNGINKRLTHNIIKLIKEFERLKFKKLDIRCKDIYVDKKCKLRIIDPKNNYSKTVVYPRHLMKGLNKL KVLDDFFIQVEKEERKYYNLWSTRMKDYLEKGIK
Sequences:
>Translated_194_residues MEKQEYYIDLNNKVEKMLRKGEFLGSGHNGIVYLLPDKKVIKIFKEKKVCKKEREILQKTNNSKYFPKVYDYGDYFILRE YIRGERLDHYIKQNGINKRLTHNIIKLIKEFERLKFKKLDIRCKDIYVDKKCKLRIIDPKNNYSKTVVYPRHLMKGLNKL KVLDDFFIQVEKEERKYYNLWSTRMKDYLEKGIK >Mature_194_residues MEKQEYYIDLNNKVEKMLRKGEFLGSGHNGIVYLLPDKKVIKIFKEKKVCKKEREILQKTNNSKYFPKVYDYGDYFILRE YIRGERLDHYIKQNGINKRLTHNIIKLIKEFERLKFKKLDIRCKDIYVDKKCKLRIIDPKNNYSKTVVYPRHLMKGLNKL KVLDDFFIQVEKEERKYYNLWSTRMKDYLEKGIK
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23733; Mature: 23733
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQEYYIDLNNKVEKMLRKGEFLGSGHNGIVYLLPDKKVIKIFKEKKVCKKEREILQKT CCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC NNSKYFPKVYDYGDYFILREYIRGERLDHYIKQNGINKRLTHNIIKLIKEFERLKFKKLD CCCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC IRCKDIYVDKKCKLRIIDPKNNYSKTVVYPRHLMKGLNKLKVLDDFFIQVEKEERKYYNL CEEEEEEECCCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSTRMKDYLEKGIK HHHHHHHHHHHCCC >Mature Secondary Structure MEKQEYYIDLNNKVEKMLRKGEFLGSGHNGIVYLLPDKKVIKIFKEKKVCKKEREILQKT CCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC NNSKYFPKVYDYGDYFILREYIRGERLDHYIKQNGINKRLTHNIIKLIKEFERLKFKKLD CCCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC IRCKDIYVDKKCKLRIIDPKNNYSKTVVYPRHLMKGLNKLKVLDDFFIQVEKEERKYYNL CEEEEEEECCCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSTRMKDYLEKGIK HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA