| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755565
Identifier: 170755565
GI number: 170755565
Start: 662443
End: 662883
Strand: Direct
Name: 170755565
Synonym: CLD_0211
Alternate gene names: NA
Gene position: 662443-662883 (Clockwise)
Preceding gene: 170757598
Following gene: 170756231
Centisome position: 16.74
GC content: 30.16
Gene sequence:
>441_bases ATGTGGAGCAATTTTGATATTATTGTTTGGATAATAATTGGGACTGCTGCTTTGCTGTTGGATCTTGCTACTAGTTCCTT TTTATTTGTTTGGTTCACTTTAGGGGCTATAGCTGCACTCATAGTTCAAATATTAGGATATTCAATGTATATACAAATTA TTGTTTTTACGTTAATCAGTATTTTATGTATGATATTAGGTTATCCAATGGTAAAGAAGATTATTAAAAAACAGGAGAAT TCTATATTATCTATTGAAAGAAATTATGTTGGGGAAATTTTTATTGCAGATAAGGATATAAAAGATGAGGGGGTGCTAAA GTTCCAAGGTGTATATTGGAGGGTCACAAATAGTGGCAATCATATAAAAAAGGGAGACAAGGTAAAGATAAATTCAGTAA AAGGTAACAAAATTTTTGTTAAAAAGGTAGAGGAGGAATAA
Upstream 100 bases:
>100_bases TATCATATAATGTATAGTTTTATAAAGTTAAAAAATATTTATAGTATTTATAAAATTTTGATGTATAATATATAGTAATA ATTCAAGAGGGAGGGAGAGT
Downstream 100 bases:
>100_bases GCATGGCGATACTTGCAATTGTATTATTAGTTATTATATTAGTAACATTTTTGATGTCTATAAAAGTTGTAAATACAGGT TATGTCTCTATTGTAGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MWSNFDIIVWIIIGTAALLLDLATSSFLFVWFTLGAIAALIVQILGYSMYIQIIVFTLISILCMILGYPMVKKIIKKQEN SILSIERNYVGEIFIADKDIKDEGVLKFQGVYWRVTNSGNHIKKGDKVKINSVKGNKIFVKKVEEE
Sequences:
>Translated_146_residues MWSNFDIIVWIIIGTAALLLDLATSSFLFVWFTLGAIAALIVQILGYSMYIQIIVFTLISILCMILGYPMVKKIIKKQEN SILSIERNYVGEIFIADKDIKDEGVLKFQGVYWRVTNSGNHIKKGDKVKINSVKGNKIFVKKVEEE >Mature_146_residues MWSNFDIIVWIIIGTAALLLDLATSSFLFVWFTLGAIAALIVQILGYSMYIQIIVFTLISILCMILGYPMVKKIIKKQEN SILSIERNYVGEIFIADKDIKDEGVLKFQGVYWRVTNSGNHIKKGDKVKINSVKGNKIFVKKVEEE
Specific function: Unknown
COG id: COG1585
COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16592; Mature: 16592
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSNFDIIVWIIIGTAALLLDLATSSFLFVWFTLGAIAALIVQILGYSMYIQIIVFTLIS CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILCMILGYPMVKKIIKKQENSILSIERNYVGEIFIADKDIKDEGVLKFQGVYWRVTNSGN HHHHHHCCHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCC HIKKGDKVKINSVKGNKIFVKKVEEE CCCCCCEEEEEEECCCEEEEEEECCC >Mature Secondary Structure MWSNFDIIVWIIIGTAALLLDLATSSFLFVWFTLGAIAALIVQILGYSMYIQIIVFTLIS CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILCMILGYPMVKKIIKKQENSILSIERNYVGEIFIADKDIKDEGVLKFQGVYWRVTNSGN HHHHHHCCHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCC HIKKGDKVKINSVKGNKIFVKKVEEE CCCCCCEEEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA