Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755517

Identifier: 170755517

GI number: 170755517

Start: 869837

End: 870193

Strand: Direct

Name: 170755517

Synonym: CLD_0012

Alternate gene names: NA

Gene position: 869837-870193 (Clockwise)

Preceding gene: 170754474

Following gene: 170757472

Centisome position: 21.98

GC content: 26.89

Gene sequence:

>357_bases
ATGAATAGCGTAGCTTATGATAAAGCGTTTAGTTTTGCTTTAGATATAATTGAATTGTATAAGAATTTAACACTTAAAAA
AAGTGAGTATGTACTTTCAAAACAAATTCTTAGATCTGGCACTAGTATAGGGGCGAATATAAAGGAAGGTATTAATGGAC
AAAGTAAAAAGGATTTTTTGTCAAAAATGAGTATAGCCTTAAAAGAGGCAGAAGAGACGGAATATTGGATTCAATTACTA
AGATATAGCAATTATATAGATGACAAGATAACTTATTTATTGTTAGAAAACTGCAAAGAAATAATAAAAATTCTAGTAAC
TACAATAAAAACAACAAAGATGAACCTTAAACTTTAA

Upstream 100 bases:

>100_bases
ATAGTTAAAATTAGAGTATAGAGTACAGATTAGAGAGGGCATAAGAATTAGATTAGGTGGCTAGAATTAAGATATATTAT
TTTAATTCTGGAGGATTATG

Downstream 100 bases:

>100_bases
ACTCCTAAAAAATTTATTTTTACTCTATACTCTAAAATTAACCGCTCTGTCCTCTTTACTTTGTGATTTGTAATCTAAAA
TTAACCACTCTGTTCTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNSVAYDKAFSFALDIIELYKNLTLKKSEYVLSKQILRSGTSIGANIKEGINGQSKKDFLSKMSIALKEAEETEYWIQLL
RYSNYIDDKITYLLLENCKEIIKILVTTIKTTKMNLKL

Sequences:

>Translated_118_residues
MNSVAYDKAFSFALDIIELYKNLTLKKSEYVLSKQILRSGTSIGANIKEGINGQSKKDFLSKMSIALKEAEETEYWIQLL
RYSNYIDDKITYLLLENCKEIIKILVTTIKTTKMNLKL
>Mature_118_residues
MNSVAYDKAFSFALDIIELYKNLTLKKSEYVLSKQILRSGTSIGANIKEGINGQSKKDFLSKMSIALKEAEETEYWIQLL
RYSNYIDDKITYLLLENCKEIIKILVTTIKTTKMNLKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13595; Mature: 13595

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVAYDKAFSFALDIIELYKNLTLKKSEYVLSKQILRSGTSIGANIKEGINGQSKKDFL
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH
SKMSIALKEAEETEYWIQLLRYSNYIDDKITYLLLENCKEIIKILVTTIKTTKMNLKL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSVAYDKAFSFALDIIELYKNLTLKKSEYVLSKQILRSGTSIGANIKEGINGQSKKDFL
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH
SKMSIALKEAEETEYWIQLLRYSNYIDDKITYLLLENCKEIIKILVTTIKTTKMNLKL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA