| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is sfsA
Identifier: 170755512
GI number: 170755512
Start: 41727
End: 42419
Strand: Direct
Name: sfsA
Synonym: CLD_0781
Alternate gene names: 170755512
Gene position: 41727-42419 (Clockwise)
Preceding gene: 170756047
Following gene: 170754535
Centisome position: 1.05
GC content: 27.27
Gene sequence:
>693_bases TTGAAAATAACTAAAAATATACTAAAAGCTGAATTTATAAAAAGGCCAAATAGATTTCAGGCTTATGTAAAAATAAATGA GAAAATAGAAATGGTTCATGTTCCTAATACAGGAAGATGCAAAGAGATATTGATTCCAGGTTCTACGGTCATATTGAGAG AAGAAAATAATGAAAATAGAAAAACTCGATATGATTTAATAGCTGGATATAAGGGAGATATGCTTATAAGTATAGATTCC CAAATACCTAATAAGGTAGTCTATGAAGCATTAATGAACTTTAAAATAGAAATTCTTAAAGAGTATACTAATATTAAAAG GGAAAAAACCTTTGGTAAAAGTAGATTTGATTTTAAATTAGAAAAAGAAAATGGAGAAGTATATTATTTAGAAGTAAAAG GAGTAACTCTTGAAAATGATGGTTTAACTATGTTTCCAGATGCTCCTACAGAAAGAGGAACAAAACATATATTAGAACTT ATAGATGTGAAAAATAAAGGTATGGGTGCAGGTGTACTATTTTTAATACAATTAAATGGTGTAAAAAAATTTACACCAAA CCATAAAATGGATAAGAATTTTGGAGAAGCTTTAAAGTTAGCAAAAGAAAAGGGTGTAGATATTTTAGCCTATGATTGTT TAGTTGAGGAGAGTAGTATTTCTTTAAATAATCCTGTATCAATAGAAATCTAG
Upstream 100 bases:
>100_bases AATATGTGGATAAAAACTGTGGATATGTGTATAATTATATTTGAATTTATATATTAACTATGAGAGGAGGCTTATCGAAA TTTTTTCGATAAAATAAATT
Downstream 100 bases:
>100_bases ACCAAAATTTAAAATTACGAGAAGTGGAGGGAAAGCTTTTTATTAAGCTAAATATATGAAATTTAAATACTGTCCACTAT GTGGGGAAAAATTAATTGAA
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKITKNILKAEFIKRPNRFQAYVKINEKIEMVHVPNTGRCKEILIPGSTVILREENNENRKTRYDLIAGYKGDMLISIDS QIPNKVVYEALMNFKIEILKEYTNIKREKTFGKSRFDFKLEKENGEVYYLEVKGVTLENDGLTMFPDAPTERGTKHILEL IDVKNKGMGAGVLFLIQLNGVKKFTPNHKMDKNFGEALKLAKEKGVDILAYDCLVEESSISLNNPVSIEI
Sequences:
>Translated_230_residues MKITKNILKAEFIKRPNRFQAYVKINEKIEMVHVPNTGRCKEILIPGSTVILREENNENRKTRYDLIAGYKGDMLISIDS QIPNKVVYEALMNFKIEILKEYTNIKREKTFGKSRFDFKLEKENGEVYYLEVKGVTLENDGLTMFPDAPTERGTKHILEL IDVKNKGMGAGVLFLIQLNGVKKFTPNHKMDKNFGEALKLAKEKGVDILAYDCLVEESSISLNNPVSIEI >Mature_230_residues MKITKNILKAEFIKRPNRFQAYVKINEKIEMVHVPNTGRCKEILIPGSTVILREENNENRKTRYDLIAGYKGDMLISIDS QIPNKVVYEALMNFKIEILKEYTNIKREKTFGKSRFDFKLEKENGEVYYLEVKGVTLENDGLTMFPDAPTERGTKHILEL IDVKNKGMGAGVLFLIQLNGVKKFTPNHKMDKNFGEALKLAKEKGVDILAYDCLVEESSISLNNPVSIEI
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=235, Percent_Identity=31.4893617021277, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 26319; Mature: 26319
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITKNILKAEFIKRPNRFQAYVKINEKIEMVHVPNTGRCKEILIPGSTVILREENNENR CCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCC KTRYDLIAGYKGDMLISIDSQIPNKVVYEALMNFKIEILKEYTNIKREKTFGKSRFDFKL CEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE EKENGEVYYLEVKGVTLENDGLTMFPDAPTERGTKHILELIDVKNKGMGAGVLFLIQLNG ECCCCCEEEEEEEEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECC VKKFTPNHKMDKNFGEALKLAKEKGVDILAYDCLVEESSISLNNPVSIEI CEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCEEEEC >Mature Secondary Structure MKITKNILKAEFIKRPNRFQAYVKINEKIEMVHVPNTGRCKEILIPGSTVILREENNENR CCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCC KTRYDLIAGYKGDMLISIDSQIPNKVVYEALMNFKIEILKEYTNIKREKTFGKSRFDFKL CEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE EKENGEVYYLEVKGVTLENDGLTMFPDAPTERGTKHILELIDVKNKGMGAGVLFLIQLNG ECCCCCEEEEEEEEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECC VKKFTPNHKMDKNFGEALKLAKEKGVDILAYDCLVEESSISLNNPVSIEI CEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA