Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755499

Identifier: 170755499

GI number: 170755499

Start: 2594159

End: 2595235

Strand: Reverse

Name: 170755499

Synonym: CLD_2168

Alternate gene names: NA

Gene position: 2595235-2594159 (Counterclockwise)

Preceding gene: 170756518

Following gene: 170756697

Centisome position: 65.57

GC content: 33.98

Gene sequence:

>1077_bases
ATGAGTTTTCAATTACCAAAATTTACACCACCGGATTTTACACAAGATGTTCTTGTTAAAGCACCAGATGTTAAAATAGG
TGAAGTTGAAAAAGATGGAGTAGCTCCTCAAGGATTCTATATAACTTCTGTATTGCCAGAATATTTTAAGGTTAAAGGTG
AATGGATTTTACCAGCTCAAACATCTCTAGATTGTGCTGCAATAGTTAAAGATGATAACACTGTAGAAGTTGTAGAATTC
AGAAGTCTTAAAGTTGGAGATAAAGTTATATTAGGAAAATCTGTAGATGGAAGCGAAGGTATCTACAAATATCTTGGAGG
TTTTGATAACATACCAAAGGTTGGATTTGGAAGATCTGTTGAATCATCTTTTTCAAAAGACTACAAAGAATTATATGAAT
TATTAAGATATGAAAAAGAAAATAATGGACATATAGTTTGGGTTTTAGGACCTGCTGTTGTATTTGACTATGATACTAGG
GTAGCTTTATCAGAGCTTGCTGAAAAAGGATTTGTAAATGCTCTTATGGCTGGTAATGCTATGGCTACTCATGACTTAGA
AGGAGGACTTTTAGGTACTGCTTTAGGACAAAACATATATACTCAAGAGTCAGTTCCAATGGGTCACTACAATCACTTAG
ACCTTATAAATGAAGCTAGAAGAGCTGGATCTATAGAAGCTCTACTTTCTGAAGGAAATGTTAAAGATGGATTTATAAAA
GCTTGTGTAGAACATAATATTCCAATAGTTCTTGCAGGATCAATAAGAGATGATGGTCCACTTCCTCCAGTTTATCACAA
TGTAACTTGTGGACTTGATGCTATGAAAGAACAAGCTCAAAAGGCAACTGTTATAATTTGTCTTGCTACAGTTCTTCACT
CAGTAGCAACTGCAAACTTAGCTTCATCTTACAAAGTTGTGGATGGCATCGTTCGACCAGTATATGTTTACTCTATAGAT
ATTGCTGAATATGCAGTTAATCAAGTAGCAGCAGCTAGAGAACATGTAGGTGTTAAAACAATAGTTACTAACGTTCAAGA
TTTTGTTGTTAATGTTCAAAAGAACGTTCTTAAATAA

Upstream 100 bases:

>100_bases
AATTTAAAATCAGTTGTAACCTAGTTAATAATATTATATTTATATAATATATAACCCTAATACAATTTAAAATATATTAC
ATTAAGGAGGAAATTTAAAA

Downstream 100 bases:

>100_bases
GAAATTGTAAAGACTTAACTTTGAAAATTGATAAGAGACTAAGATACATTAATATATTATTAGGAGGAGATTTTAAATGA
GTTTCGAATTACCAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSFQLPKFTPPDFTQDVLVKAPDVKIGEVEKDGVAPQGFYITSVLPEYFKVKGEWILPAQTSLDCAAIVKDDNTVEVVEF
RSLKVGDKVILGKSVDGSEGIYKYLGGFDNIPKVGFGRSVESSFSKDYKELYELLRYEKENNGHIVWVLGPAVVFDYDTR
VALSELAEKGFVNALMAGNAMATHDLEGGLLGTALGQNIYTQESVPMGHYNHLDLINEARRAGSIEALLSEGNVKDGFIK
ACVEHNIPIVLAGSIRDDGPLPPVYHNVTCGLDAMKEQAQKATVIICLATVLHSVATANLASSYKVVDGIVRPVYVYSID
IAEYAVNQVAAAREHVGVKTIVTNVQDFVVNVQKNVLK

Sequences:

>Translated_358_residues
MSFQLPKFTPPDFTQDVLVKAPDVKIGEVEKDGVAPQGFYITSVLPEYFKVKGEWILPAQTSLDCAAIVKDDNTVEVVEF
RSLKVGDKVILGKSVDGSEGIYKYLGGFDNIPKVGFGRSVESSFSKDYKELYELLRYEKENNGHIVWVLGPAVVFDYDTR
VALSELAEKGFVNALMAGNAMATHDLEGGLLGTALGQNIYTQESVPMGHYNHLDLINEARRAGSIEALLSEGNVKDGFIK
ACVEHNIPIVLAGSIRDDGPLPPVYHNVTCGLDAMKEQAQKATVIICLATVLHSVATANLASSYKVVDGIVRPVYVYSID
IAEYAVNQVAAAREHVGVKTIVTNVQDFVVNVQKNVLK
>Mature_357_residues
SFQLPKFTPPDFTQDVLVKAPDVKIGEVEKDGVAPQGFYITSVLPEYFKVKGEWILPAQTSLDCAAIVKDDNTVEVVEFR
SLKVGDKVILGKSVDGSEGIYKYLGGFDNIPKVGFGRSVESSFSKDYKELYELLRYEKENNGHIVWVLGPAVVFDYDTRV
ALSELAEKGFVNALMAGNAMATHDLEGGLLGTALGQNIYTQESVPMGHYNHLDLINEARRAGSIEALLSEGNVKDGFIKA
CVEHNIPIVLAGSIRDDGPLPPVYHNVTCGLDAMKEQAQKATVIICLATVLHSVATANLASSYKVVDGIVRPVYVYSIDI
AEYAVNQVAAAREHVGVKTIVTNVQDFVVNVQKNVLK

Specific function: Unknown

COG id: COG1915

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005239
- InterPro:   IPR007545 [H]

Pfam domain/function: PF04455 Saccharop_dh_N [H]

EC number: NA

Molecular weight: Translated: 38996; Mature: 38865

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQLPKFTPPDFTQDVLVKAPDVKIGEVEKDGVAPQGFYITSVLPEYFKVKGEWILPAQ
CCCCCCCCCCCCCCHHHHEECCCCEECCCCCCCCCCCCEEHHHHHHHHHHCCCCEEECCC
TSLDCAAIVKDDNTVEVVEFRSLKVGDKVILGKSVDGSEGIYKYLGGFDNIPKVGFGRSV
CCCCEEEEEECCCEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCH
ESSFSKDYKELYELLRYEKENNGHIVWVLGPAVVFDYDTRVALSELAEKGFVNALMAGNA
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHCCCC
MATHDLEGGLLGTALGQNIYTQESVPMGHYNHLDLINEARRAGSIEALLSEGNVKDGFIK
EEECCCCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHH
ACVEHNIPIVLAGSIRDDGPLPPVYHNVTCGLDAMKEQAQKATVIICLATVLHSVATANL
HHHHCCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSYKVVDGIVRPVYVYSIDIAEYAVNQVAAAREHVGVKTIVTNVQDFVVNVQKNVLK
HHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFQLPKFTPPDFTQDVLVKAPDVKIGEVEKDGVAPQGFYITSVLPEYFKVKGEWILPAQ
CCCCCCCCCCCCCHHHHEECCCCEECCCCCCCCCCCCEEHHHHHHHHHHCCCCEEECCC
TSLDCAAIVKDDNTVEVVEFRSLKVGDKVILGKSVDGSEGIYKYLGGFDNIPKVGFGRSV
CCCCEEEEEECCCEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCH
ESSFSKDYKELYELLRYEKENNGHIVWVLGPAVVFDYDTRVALSELAEKGFVNALMAGNA
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHCCCC
MATHDLEGGLLGTALGQNIYTQESVPMGHYNHLDLINEARRAGSIEALLSEGNVKDGFIK
EEECCCCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHH
ACVEHNIPIVLAGSIRDDGPLPPVYHNVTCGLDAMKEQAQKATVIICLATVLHSVATANL
HHHHCCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSYKVVDGIVRPVYVYSIDIAEYAVNQVAAAREHVGVKTIVTNVQDFVVNVQKNVLK
HHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]