| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755493
Identifier: 170755493
GI number: 170755493
Start: 721414
End: 721734
Strand: Direct
Name: 170755493
Synonym: CLD_0158
Alternate gene names: NA
Gene position: 721414-721734 (Clockwise)
Preceding gene: 170755098
Following gene: 170756054
Centisome position: 18.23
GC content: 29.28
Gene sequence:
>321_bases ATGGCTAGGAAGGATTCTATTGAAATTGGAGAACTAACTGATTCAGCCTTTTATATTTTAGCTAGTGTTATTGAGGAAAA ACACGGATACTTAATCATGAAAGTTATTGAAAAATTTACTAATGGTGAAGTGAATATTGGACCAGCATCCCTTTATACCA CATTAAGAAAACTTTTAATATCAGGATTGGTTGAATTAACCCCTAATATACATGAAAACAAGAAAGTTTATAGGATAACA GATAAAGGAAAAGAAATGCTTGTACAAGAAATAAATCGTAAAAAGCAAATGATTAAATTTGCTGAGAATTTTTTGAAGTA G
Upstream 100 bases:
>100_bases TTGACTGATATATCATTTAATGATATATTATATTTAATGATATATCATTAAATGATATATAGAATTTCATGGTACATAAA AAGATGGGAAGGAGAATTTT
Downstream 100 bases:
>100_bases AAAAGGGGGAATGTTTATGAAAAGTAAATATGTAATGATTGGTGGATTCGCGTTTAGTGAAGAAAGTGATATGGAAAAAC TAAGAAATTATGCAAAAAAG
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; PadR Family Regulatory Protein
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVNIGPASLYTTLRKLLISGLVELTPNIHENKKVYRIT DKGKEMLVQEINRKKQMIKFAENFLK
Sequences:
>Translated_106_residues MARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVNIGPASLYTTLRKLLISGLVELTPNIHENKKVYRIT DKGKEMLVQEINRKKQMIKFAENFLK >Mature_105_residues ARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVNIGPASLYTTLRKLLISGLVELTPNIHENKKVYRITD KGKEMLVQEINRKKQMIKFAENFLK
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12188; Mature: 12056
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVNIGPASLYTTLRKLLI CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH SGLVELTPNIHENKKVYRITDKGKEMLVQEINRKKQMIKFAENFLK HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVNIGPASLYTTLRKLLI CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH SGLVELTPNIHENKKVYRITDKGKEMLVQEINRKKQMIKFAENFLK HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA