| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170755476
Identifier: 170755476
GI number: 170755476
Start: 138186
End: 139487
Strand: Direct
Name: 170755476
Synonym: CLD_0683
Alternate gene names: NA
Gene position: 138186-139487 (Clockwise)
Preceding gene: 170756927
Following gene: 170754234
Centisome position: 3.49
GC content: 29.11
Gene sequence:
>1302_bases ATGAGAAAAATATTGTATTATGACTGTTTTTCGGGAATAAGTGGGGATATGAATTTAGGTGCTTTAATAGATTTAGGTGT AGATAAGGAGTATCTATTAAAAGAATTAGCTAAGCTTAATATTAATGATGAATTTGAAATTAAAATAAATAAGGACTCTA GAAAAGGTATATCAGGAACAAAAGTTGATGTTATATTAAAAAATTCATATGAGCATAGCCATGGACATGAACACAACCAT GAATGTGAACATAGTCGTGGACATGAACATGAACACAACCATGAACATAGCCATGAGCATGAACATGGACATGGACATAA TCATGCTCATAATCACAGAAATGTGATAAATATAAATAAAATAATAGATAACAGTAATCTAAATGATAATGTTAAAAAAA TTAGCAAAGAAATATTTTTAGAGGTAGCAAAAGCTGAAGGAAAAGTGCATAATAAACCTTTAGAAGAGGTTCATTTTCAT GAAGTTGGTGCAACAGATTCAATAGTAGATATAGTTGGGGCTGCTATATGTTTAGATTATTTAAAAGTAGATAAAGTATT ATGTTCAAAGGTTCAAGTAGGATCTGGATTTGTAAAATGTGCCCATGGAACAATGCCAGTTCCAGCACCAGCTACAGCAG AGATATTAAGAGATATACCAATGATATCTTCAGAAGAAATACCTTTTGAAGCAACTACGCCTACAGGAGCAGCTATAGTA GCTTCTACAGTATATAAATTTACACAAAACAAAAATTTTCATATTGAAAAAGTTGGATATGGTATAGGTGGAAAAGATTT ATCAGATATACCTAATGTATTAAGAGTTTTTTTAGCAGAAGTTAAAGAGCAGGAAGAAAATGATATTGAAAAAGAAGAAG CTTTAATATTAGAATGCAATATAGATGATATGAATTCTGAAATTTATGAATATGTGATTAACAAACTACTTCATGAAGGA GCATCAGATGCCTATATAACACCAATAATAATGAAGAAAACTAGACCTGCTGCTAAATTAACGGTTCTATGTGAAAATAA ATTAGAAAATATTATGAGAGAAATTATGTTTAAAGAGACTACTACATTAGGAATAAGAAAATATTCTGTAGAGAAATCTA TGCTAAAGAGAAAAATAGAAAAAGTAAAGACTATATATGGAGAGATTTCTGTAAAAAAATCTTATTTAAAAGGTCAGGTA TTAAACAGTAAACCAGAATATGAGGATTGCAAAAAAATTGCATTAGAAAATAATATACCTATAAAAGAAGTTTATGAGGC AGTTAATGAACGTAAGGAGTAA
Upstream 100 bases:
>100_bases AATATATGTTAAAATTAATTATATATTTAGACAATTATTGTGAATAATATAAATTGATATTATACTTTATATAATAAATA TAAAATAAGGAGAATGAAAT
Downstream 100 bases:
>100_bases TATTATGAATATAAATGATAAATATAATAATCTTATTAATTATCTAAAAGATCTAAAAAGTGTGGCAGTAGCTTTTTCTG GTGGTGTTGATAGTACATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGTKVDVILKNSYEHSHGHEHNH ECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFH EVGATDSIVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECNIDDMNSEIYEYVINKLLHEG ASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQV LNSKPEYEDCKKIALENNIPIKEVYEAVNERKE
Sequences:
>Translated_433_residues MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGTKVDVILKNSYEHSHGHEHNH ECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFH EVGATDSIVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECNIDDMNSEIYEYVINKLLHEG ASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQV LNSKPEYEDCKKIALENNIPIKEVYEAVNERKE >Mature_433_residues MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGTKVDVILKNSYEHSHGHEHNH ECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFH EVGATDSIVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECNIDDMNSEIYEYVINKLLHEG ASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQV LNSKPEYEDCKKIALENNIPIKEVYEAVNERKE
Specific function: Unknown
COG id: COG1641
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0272 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002822 [H]
Pfam domain/function: PF01969 DUF111 [H]
EC number: NA
Molecular weight: Translated: 49005; Mature: 49005
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGT CCEEEEEEHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC KVDVILKNSYEHSHGHEHNHECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININK EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHH IIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFHEVGATDSIVDIVGAAICLDY HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH LKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV HHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECN HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC IDDMNSEIYEYVINKLLHEGASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKET CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHEEEEHHHHHHHHHHHHHHHHH TTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQVLNSKPEYEDCKKIALENNIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC IKEVYEAVNERKE HHHHHHHHHHCCC >Mature Secondary Structure MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGT CCEEEEEEHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC KVDVILKNSYEHSHGHEHNHECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININK EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHH IIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFHEVGATDSIVDIVGAAICLDY HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH LKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV HHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECN HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC IDDMNSEIYEYVINKLLHEGASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKET CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHEEEEHHHHHHHHHHHHHHHHH TTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQVLNSKPEYEDCKKIALENNIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC IKEVYEAVNERKE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]