| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755457
Identifier: 170755457
GI number: 170755457
Start: 2031176
End: 2031433
Strand: Reverse
Name: 170755457
Synonym: CLD_2724
Alternate gene names: NA
Gene position: 2031433-2031176 (Counterclockwise)
Preceding gene: 170754440
Following gene: 170756543
Centisome position: 51.32
GC content: 17.44
Gene sequence:
>258_bases ATGTGTAAATCAATGTATATTAAAAATGATATTAACAATTTATCAGATAATAGTTTTATATATAATTTTGCGGAATATTT TAAATTAAAAGAAATTAAAAAAAATAATTATATATATTTTTTTGAGAATAAAGATATGATAGTAAAAATTGAACCTAGTA TAGTTGAATTTTTACTATATGATGGTTCAAATAGAGAAATCGAATATAAAATCAAAAACTACTTTTTAAATAAGAAAAAG CATAATATTGAGGTGTGA
Upstream 100 bases:
>100_bases TGACGTTCAATTATTTTCACATCTAAAAACAATTTACGAACATAAAATGCCGAACATAAATAATAATAATAAATAAGTAG AAGTTCGGGGGGAATAGTAT
Downstream 100 bases:
>100_bases CACTATGAAACAAAGGAATAATTCAATTTTAAAGGAACTTAATTGTGTATTAAGTTCCCTTGAAATAAAATATCATGATA TAGTAGGAAGTAATGAAAAT
Product: ribosomal RNA methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MCKSMYIKNDINNLSDNSFIYNFAEYFKLKEIKKNNYIYFFENKDMIVKIEPSIVEFLLYDGSNREIEYKIKNYFLNKKK HNIEV
Sequences:
>Translated_85_residues MCKSMYIKNDINNLSDNSFIYNFAEYFKLKEIKKNNYIYFFENKDMIVKIEPSIVEFLLYDGSNREIEYKIKNYFLNKKK HNIEV >Mature_85_residues MCKSMYIKNDINNLSDNSFIYNFAEYFKLKEIKKNNYIYFFENKDMIVKIEPSIVEFLLYDGSNREIEYKIKNYFLNKKK HNIEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10441; Mature: 10441
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKSMYIKNDINNLSDNSFIYNFAEYFKLKEIKKNNYIYFFENKDMIVKIEPSIVEFLLY CCCCEEEECCCCCCCCCCEEEHHHHHHHHEEECCCCEEEEECCCCEEEEECHHHEEEEEE DGSNREIEYKIKNYFLNKKKHNIEV CCCCCEEEEEEEEEEECCCCCCCCC >Mature Secondary Structure MCKSMYIKNDINNLSDNSFIYNFAEYFKLKEIKKNNYIYFFENKDMIVKIEPSIVEFLLY CCCCEEEECCCCCCCCCCEEEHHHHHHHHEEECCCCEEEEECCCCEEEEECHHHEEEEEE DGSNREIEYKIKNYFLNKKKHNIEV CCCCCEEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA