| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755441
Identifier: 170755441
GI number: 170755441
Start: 2475026
End: 2475760
Strand: Reverse
Name: 170755441
Synonym: CLD_2291
Alternate gene names: NA
Gene position: 2475760-2475026 (Counterclockwise)
Preceding gene: 170754633
Following gene: 170756721
Centisome position: 62.55
GC content: 27.07
Gene sequence:
>735_bases ATGTCAAATATTGTAATATGTGAACTAAAGAAGTTTAAAAGAATTTGGATTCCATTAATTATTGGAGTATTTATTGTTAT TCAATTTAGTTCAGTAACTTTAAACACAGCAGTTATGAAAAATGCAGATGATTTATTTACTTGGATAAACTTAACGGTGT TTTCCTATGGTTTTTTAGCAGCTATAAATATGCTTATTGCCTATATGTTTATCTGGGAATTTAATAATAACACAATGTTA TCTATGTTAACATATAAGCACAAAAGATGGAAAGTATTTGTGGGTAAAATCATTTCTGCAATATTAATATCTCTATTATT ATATATTGTAGAATTTCTTATGCTTACATTAATGAATTATATATCTTTTAGAGATACACTTACAAGAGCAGTTATGATAA AACATCTAATGATAACTTTAAAATCCTTTTTCTTTCAGATGCTTATGATTACAGTAACTGCATCTTTAGCAATTGTAAGT AAAAAGATTATTGTTCCAGTAATATATATTGGTATTCAGCTTGTAGCTAGTTTTATGTTTTTAAGTGAACCAGCGATAAG AGCATTCATACCATTTCCGCTACCAGTAATATCTAATCTTATGCTAATACGTAATCATCATAAAATTATTAAGGATATCT CAATTATGCCAAGTCAAGTTATAATAGCTGCTGTAATGTTTATTGGAGGCATTGCATACGGATGTTGGTATATAAATAGA ATGGAGGTAGAATAA
Upstream 100 bases:
>100_bases TTTCTATATTTGTTCTAGGTATTGTAGGATGTATTTTATTTTATAGAAAAGCTAATATTTATTAAGAAGGTAGATATTAT TTTTAATTAGGAGGTCTTTT
Downstream 100 bases:
>100_bases TAAGATATATGATTATGAAAACACTAATCTATTAAAAGGATAAATCTAAAAAATAAAGTTCTCTTTTAATATTCTAAAAA ATAGGATTTGAATAATAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSNIVICELKKFKRIWIPLIIGVFIVIQFSSVTLNTAVMKNADDLFTWINLTVFSYGFLAAINMLIAYMFIWEFNNNTML SMLTYKHKRWKVFVGKIISAILISLLLYIVEFLMLTLMNYISFRDTLTRAVMIKHLMITLKSFFFQMLMITVTASLAIVS KKIIVPVIYIGIQLVASFMFLSEPAIRAFIPFPLPVISNLMLIRNHHKIIKDISIMPSQVIIAAVMFIGGIAYGCWYINR MEVE
Sequences:
>Translated_244_residues MSNIVICELKKFKRIWIPLIIGVFIVIQFSSVTLNTAVMKNADDLFTWINLTVFSYGFLAAINMLIAYMFIWEFNNNTML SMLTYKHKRWKVFVGKIISAILISLLLYIVEFLMLTLMNYISFRDTLTRAVMIKHLMITLKSFFFQMLMITVTASLAIVS KKIIVPVIYIGIQLVASFMFLSEPAIRAFIPFPLPVISNLMLIRNHHKIIKDISIMPSQVIIAAVMFIGGIAYGCWYINR MEVE >Mature_243_residues SNIVICELKKFKRIWIPLIIGVFIVIQFSSVTLNTAVMKNADDLFTWINLTVFSYGFLAAINMLIAYMFIWEFNNNTMLS MLTYKHKRWKVFVGKIISAILISLLLYIVEFLMLTLMNYISFRDTLTRAVMIKHLMITLKSFFFQMLMITVTASLAIVSK KIIVPVIYIGIQLVASFMFLSEPAIRAFIPFPLPVISNLMLIRNHHKIIKDISIMPSQVIIAAVMFIGGIAYGCWYINRM EVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28145; Mature: 28014
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIVICELKKFKRIWIPLIIGVFIVIQFSSVTLNTAVMKNADDLFTWINLTVFSYGFLA CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AINMLIAYMFIWEFNNNTMLSMLTYKHKRWKVFVGKIISAILISLLLYIVEFLMLTLMNY HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISFRDTLTRAVMIKHLMITLKSFFFQMLMITVTASLAIVSKKIIVPVIYIGIQLVASFMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEPAIRAFIPFPLPVISNLMLIRNHHKIIKDISIMPSQVIIAAVMFIGGIAYGCWYINR HCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEE MEVE EECC >Mature Secondary Structure SNIVICELKKFKRIWIPLIIGVFIVIQFSSVTLNTAVMKNADDLFTWINLTVFSYGFLA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AINMLIAYMFIWEFNNNTMLSMLTYKHKRWKVFVGKIISAILISLLLYIVEFLMLTLMNY HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISFRDTLTRAVMIKHLMITLKSFFFQMLMITVTASLAIVSKKIIVPVIYIGIQLVASFMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEPAIRAFIPFPLPVISNLMLIRNHHKIIKDISIMPSQVIIAAVMFIGGIAYGCWYINR HCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEE MEVE EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA