| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755426
Identifier: 170755426
GI number: 170755426
Start: 1046801
End: 1047643
Strand: Direct
Name: 170755426
Synonym: CLD_3633
Alternate gene names: NA
Gene position: 1046801-1047643 (Clockwise)
Preceding gene: 170754657
Following gene: 170756094
Centisome position: 26.45
GC content: 28.83
Gene sequence:
>843_bases ATGAAAAATGAAATAACAACATTCAAAGCAATAAGTGCTATATTTGGGGGAATTCTTGTTTTGGTAATCTGCCAATCGCT AAGCCATCTAGCTTATATACTTCCATTGCCTAAGGTAATTACGAGTATGTTTTTTGGAATAACTTATGTACTACTTTCTT ATCTTTTTCTATCAAATCTATGTGAAAAATTTTTTTGTCATAGTTTATTAGAATGTGGTATTGGAAAGCCAAAGATTAAT TTTACATGGCTAGTAATTGGAATAATTTTACCAGTGGTGGTATCTGTATTATTAATTCTTACTCCAGGATATTTTGTTAA TAATGGAAAATCAACAACTGAAATAATAAGTAAAATTATAATTTCTATTTTTACTGTAGGTTGTGCTGCAGTTGTTGAAG AAATGATTTTTAGAGGGTTTATTATGTATATATTGAAACAGCGATGGGGTAAGATGATATCTATATTTGTACCATCAATT GTTTTTGGATTACTTCATACAATGGGAGGAATGAATTTTAGTGATATTTTAATGCTATTTATCGCTGGGACAAGTGTTGG TATAATGTTTTCACTTATCACTTATGAAAGTAAAACAATCTGGTCAAGTGCTATAGTACATGCTATTTGGAATATCATTA TTATTGGAGGCATATTAGACATAGGTGTCAAGCATAATGCTGAATGCATTTATTCATATGTTCTCAATTCAAAATCAATA TTTTTAACTGGGGGACAATTCGGAATAGAAGCATCAGTAATTTCTATAATTGGATATATTGCAGTAATTAGTTTTACGAT ATCTAGAGTTTATAAAAAGAAAGATATTGCCATAGGTATTTAA
Upstream 100 bases:
>100_bases ATATATGGAAAATATGGTATAATTTTAGTGTTGGTAAATCGTAGTTATATTTTATGTTTGAATGATGATATTTTTATTAG GTCAGGAGGAAATATAGAGA
Downstream 100 bases:
>100_bases GTAATGATTGAAAAAATGAACAATTTACTAAGACATCGCACTATTCAAATATGAATTTTGGGGTGTTTTTCTTTATAGAA ATTAAAATATAATACGAAAC
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNLCEKFFCHSLLECGIGKPKIN FTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI
Sequences:
>Translated_280_residues MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNLCEKFFCHSLLECGIGKPKIN FTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI >Mature_280_residues MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNLCEKFFCHSLLECGIGKPKIN FTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30855; Mature: 30855
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CEKFFCHSLLECGIGKPKINFTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKII HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CEKFFCHSLLECGIGKPKINFTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKII HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA