| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yerI [H]
Identifier: 170755381
GI number: 170755381
Start: 1499101
End: 1500102
Strand: Direct
Name: yerI [H]
Synonym: CLD_3202
Alternate gene names: 170755381
Gene position: 1499101-1500102 (Clockwise)
Preceding gene: 170756676
Following gene: 170754581
Centisome position: 37.87
GC content: 25.45
Gene sequence:
>1002_bases ATGTATTTAGAGTGGAATTTGAGATTTAATAAAAAAATATTAAAAAAGGGATTGGAATTATATGGTGGATATACGGATAA CTGTAAAGAACTAATGGGACGGCAGAATGTTATTTATTCATTTAGGTGCTCAGGAAAAGAATATATAATAAGATTTTCTA GTTCGTTAAGACGTAGTATAATGGAAATAGAAGCAGAATTAGATTGGATTTTTTTCTTGCATAACAATGAAATTAGCGTA TCTAAACCAATATATTCTAAATATAATAATTTGGTGGAAGTTGTAGATGGGGATGGTATTCAATTTTATGTAGTTGTCTT TGAGAAAGCAAAAGGAATTTATGTTGCGAACGAATTTAGAACAAAAAAAATGTTTTTCTTGTTAGGAAAATATGTGGGGA AGATGCATTGTTTAACGAAAAAATATAATCCTAGTGAAAAAATATGGAAAAGACCACATTGGTATAATTCTAAATTATTT GATTTTATTAACATGAATATACCTCAACGTGAGAACAAAATTCATGAGATTTTTAACGAGACTATTTGCGAAACAAAAAA ATTAGTTATAGATAGTGACTCATATGGATTGATTCATTCTGATATACACTATAGAAACTTTAATATAATGGATGATACCA TAACCCTTTTTGATTTTGATGATTGTGAATATGGTTGGTTCGTAAAAGATATTTCTAATATTATTTTTTACACATATGTT GAAAATTACAGTTCATCAAATAAAGAAAATGATATGAAAATATTCTTAATAAATTTTTTTAAAGGATATTATGAAGAAAA TGATTTAGATGATAGATGGATTTTAAAATTACCACTTTTTTTAAAAATTAGAGAAATTGTTATGTATGCAATGTTATATG ATTGGAAAAAATTTACTCATTGTAGTGTTTGGGTAAGCGAATTCATGAAAGAAAGAAAAAATTTCATAGAGGAGAGTATA CCTACGATAAGAGAGATTAATTTTAATGATATTAATATATAA
Upstream 100 bases:
>100_bases ATACGAGAAGACATATAACGATATAATTAAAAATATGAACAAGAGATTTATTATTGAATGCATTAGAAAATTTAGATTTA AATGATAGGGGATAATAAAT
Downstream 100 bases:
>100_bases ATTAAAAATAACATAATAAGGTTTGGAAGAACATTTGTATTATTCCTAGTATATGTATATATTTTACTTTTATGTATATT ATTTTATTTATTGGTTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MYLEWNLRFNKKILKKGLELYGGYTDNCKELMGRQNVIYSFRCSGKEYIIRFSSSLRRSIMEIEAELDWIFFLHNNEISV SKPIYSKYNNLVEVVDGDGIQFYVVVFEKAKGIYVANEFRTKKMFFLLGKYVGKMHCLTKKYNPSEKIWKRPHWYNSKLF DFINMNIPQRENKIHEIFNETICETKKLVIDSDSYGLIHSDIHYRNFNIMDDTITLFDFDDCEYGWFVKDISNIIFYTYV ENYSSSNKENDMKIFLINFFKGYYEENDLDDRWILKLPLFLKIREIVMYAMLYDWKKFTHCSVWVSEFMKERKNFIEESI PTIREINFNDINI
Sequences:
>Translated_333_residues MYLEWNLRFNKKILKKGLELYGGYTDNCKELMGRQNVIYSFRCSGKEYIIRFSSSLRRSIMEIEAELDWIFFLHNNEISV SKPIYSKYNNLVEVVDGDGIQFYVVVFEKAKGIYVANEFRTKKMFFLLGKYVGKMHCLTKKYNPSEKIWKRPHWYNSKLF DFINMNIPQRENKIHEIFNETICETKKLVIDSDSYGLIHSDIHYRNFNIMDDTITLFDFDDCEYGWFVKDISNIIFYTYV ENYSSSNKENDMKIFLINFFKGYYEENDLDDRWILKLPLFLKIREIVMYAMLYDWKKFTHCSVWVSEFMKERKNFIEESI PTIREINFNDINI >Mature_333_residues MYLEWNLRFNKKILKKGLELYGGYTDNCKELMGRQNVIYSFRCSGKEYIIRFSSSLRRSIMEIEAELDWIFFLHNNEISV SKPIYSKYNNLVEVVDGDGIQFYVVVFEKAKGIYVANEFRTKKMFFLLGKYVGKMHCLTKKYNPSEKIWKRPHWYNSKLF DFINMNIPQRENKIHEIFNETICETKKLVIDSDSYGLIHSDIHYRNFNIMDDTITLFDFDDCEYGWFVKDISNIIFYTYV ENYSSSNKENDMKIFLINFFKGYYEENDLDDRWILKLPLFLKIREIVMYAMLYDWKKFTHCSVWVSEFMKERKNFIEESI PTIREINFNDINI
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 40312; Mature: 40312
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLEWNLRFNKKILKKGLELYGGYTDNCKELMGRQNVIYSFRCSGKEYIIRFSSSLRRSI CEEEEEECCCHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCEEEEEEHHHHHHHH MEIEAELDWIFFLHNNEISVSKPIYSKYNNLVEVVDGDGIQFYVVVFEKAKGIYVANEFR HHHHCCEEEEEEEECCEEEECCCHHHHHCCEEEEECCCCEEEEEEEEECCCCEEEECHHH TKKMFFLLGKYVGKMHCLTKKYNPSEKIWKRPHWYNSKLFDFINMNIPQRENKIHEIFNE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH TICETKKLVIDSDSYGLIHSDIHYRNFNIMDDTITLFDFDDCEYGWFVKDISNIIFYTYV HHHCCCEEEEECCCCCEEECCEEEECCEEECCEEEEEECCCCCCCHHHHHHHHEEEEEEE ENYSSSNKENDMKIFLINFFKGYYEENDLDDRWILKLPLFLKIREIVMYAMLYDWKKFTH CCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH CSVWVSEFMKERKNFIEESIPTIREINFNDINI HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC >Mature Secondary Structure MYLEWNLRFNKKILKKGLELYGGYTDNCKELMGRQNVIYSFRCSGKEYIIRFSSSLRRSI CEEEEEECCCHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCEEEEEEHHHHHHHH MEIEAELDWIFFLHNNEISVSKPIYSKYNNLVEVVDGDGIQFYVVVFEKAKGIYVANEFR HHHHCCEEEEEEEECCEEEECCCHHHHHCCEEEEECCCCEEEEEEEEECCCCEEEECHHH TKKMFFLLGKYVGKMHCLTKKYNPSEKIWKRPHWYNSKLFDFINMNIPQRENKIHEIFNE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH TICETKKLVIDSDSYGLIHSDIHYRNFNIMDDTITLFDFDDCEYGWFVKDISNIIFYTYV HHHCCCEEEEECCCCCEEECCEEEECCEEECCEEEEEECCCCCCCHHHHHHHHEEEEEEE ENYSSSNKENDMKIFLINFFKGYYEENDLDDRWILKLPLFLKIREIVMYAMLYDWKKFTH CCCCCCCCCCCEEEEEEEHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH CSVWVSEFMKERKNFIEESIPTIREINFNDINI HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9701819; 9384377 [H]