The gene/protein map for NC_010516 is currently unavailable.
Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755361

Identifier: 170755361

GI number: 170755361

Start: 578340

End: 578780

Strand: Direct

Name: 170755361

Synonym: CLD_0282

Alternate gene names: NA

Gene position: 578340-578780 (Clockwise)

Preceding gene: 170754609

Following gene: 170755894

Centisome position: 14.61

GC content: 31.75

Gene sequence:

>441_bases
GTGATAAAACAAATTATATTAGCATTTTTTGGAAGTGTGTTTCCTGTTATACTCTTTAATATTGATAGAAAAAAAATAAT
ATGGACTGGTTTTGCAGGTTCTATTGGTTGGACGGCATATCTTATAGTATATAATTATATATATAGCCCTGTTATGGCAT
CCTTTGTTGGGGCTTTTATGGTAGGAATATATAGTGAAGTTATGGCAAGAAAGCTTAAAACACCTGCTATGCAGTTTTCT
ATACCAGGTATATTTCCATTAGTACCAGGAATTACTGCTTATTATGCCATAAATTCTATAGTTGAACAAAATTATGCTTT
AGCCTATTCTAAGGGATTTCAAACTGTAGCCGTAGGTGGAGCAATTGCTTTTGGCATAATGCTTTCTTCAACTACTGTTA
GGTTTATTACAAAAATAACTCAAACTAGAGATGCAAAATAA

Upstream 100 bases:

>100_bases
TTATGTCTGGTATAGTAAAGTTTGGAGAGGCAATGCTAGTGGTAACTGCCATGGGAGCAGGAATTGCTACAGCATTGACA
TTGGGAGTAGGTGTTAAGTG

Downstream 100 bases:

>100_bases
AATATATTTAATTTTAATTTCACAAATATAAAAATTACCTTATAAATCAACTCATTTCACTAAGAAGTTCTAAACTTGGC
TCCATTAAAAATTTTTTACC

Product: hypothetical protein

Products: NA

Alternate protein names: Threonine/Serine Exporter; Integral Membrane Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFS
IPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGGAIAFGIMLSSTTVRFITKITQTRDAK

Sequences:

>Translated_146_residues
MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFS
IPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGGAIAFGIMLSSTTVRFITKITQTRDAK
>Mature_146_residues
MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFS
IPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGGAIAFGIMLSSTTVRFITKITQTRDAK

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16108; Mature: 16108

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFM
CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGIYSEVMARKLKTPAMQFSIPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGG
HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AIAFGIMLSSTTVRFITKITQTRDAK
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFM
CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGIYSEVMARKLKTPAMQFSIPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGG
HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AIAFGIMLSSTTVRFITKITQTRDAK
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA