Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755357

Identifier: 170755357

GI number: 170755357

Start: 2024687

End: 2025376

Strand: Reverse

Name: 170755357

Synonym: CLD_2735

Alternate gene names: NA

Gene position: 2025376-2024687 (Counterclockwise)

Preceding gene: 170756140

Following gene: 170755207

Centisome position: 51.17

GC content: 20.29

Gene sequence:

>690_bases
ATGGATAAAAGCAATATATGCTTAAAGGACATGAAATTTAATAGCTTAAAAGAAAAAAGTGTTATAGAGAATAATATAAT
AAAAATAGTTAGTATGGAAAAGAGAAAATTGTATTTAATACTAGAAGGAGAGAGAGTATACGCTAAATTTATAACATTGC
CTAGAATAAATAGCAGGAATAAAATAAATGAATTAATAAGAAATGAATTGATATATGAATTTAATAATATAGACAATATA
TTATATAGTTATGATATTTTAAGGAAGAATAAAACTAGTATGGAAGGTATAATTTTTTGTATAAATATAGGAAATAATAA
AATATTAAAAAAATGCATGGCGCAGTGCAAAAATATAGCAGGTATATATTCTATACAATTCTCTGTATTAAATTTATACA
AGGAATATATAAAGGAAAAAAATTATATTTTTTTATTTAAGCATAAAAAGTACACTTACATAATACTTTATTCAGAAAAT
AATTTAATTTATAGTAATTTTATTTATGAAGGGGAAAAAGAAGAGCACAAAATAGAAAAAGTTCTAAAAAAAGCTGAGGA
TCTAAATATAACCCTAAATACCATATATGGAATAAATATAGATAATGATTCTATAAAAGATAAGCTAAAAGAATATAATT
TTGTATCTTTACAAAAATTTAGAGAAAAAGACTATAAAAAAATAATATAG

Upstream 100 bases:

>100_bases
AATTTCTGCTAAGGATTCTAATATAGCTTATAAAAGGGAGTATGTATCCTATGAAAGGAAAGTGAGTAATTAATTGTTTA
AAAATATTAACTTGTTGGAG

Downstream 100 bases:

>100_bases
TGGGAGAAAAAGAAAGTGAAAATTAATTTTATACCAGAAAGTTATATAGAAATGAACCATAAAAAATCTATAAAAAACCA
TATTATATTAATAATTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRNKINELIRNELIYEFNNIDNI
LYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIAGIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSEN
NLIYSNFIYEGEKEEHKIEKVLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII

Sequences:

>Translated_229_residues
MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRNKINELIRNELIYEFNNIDNI
LYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIAGIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSEN
NLIYSNFIYEGEKEEHKIEKVLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII
>Mature_229_residues
MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRNKINELIRNELIYEFNNIDNI
LYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIAGIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSEN
NLIYSNFIYEGEKEEHKIEKVLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27434; Mature: 27434

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRN
CCCCCEEEECCCCCCCHHHHHHHCCEEEEEEECCCEEEEEEECCEEEEEEEECCCCCCHH
KINELIRNELIYEFNNIDNILYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCC
GIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSENNLIYSNFIYEGEKEEHKIEK
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHH
VLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII
HHHHHCCCEEEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRN
CCCCCEEEECCCCCCCHHHHHHHCCEEEEEEECCCEEEEEEECCEEEEEEEECCCCCCHH
KINELIRNELIYEFNNIDNILYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCC
GIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSENNLIYSNFIYEGEKEEHKIEK
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHH
VLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII
HHHHHCCCEEEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA