The gene/protein map for NC_010516 is currently unavailable.
Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is ydaN [H]

Identifier: 170755305

GI number: 170755305

Start: 1430286

End: 1432382

Strand: Direct

Name: ydaN [H]

Synonym: CLD_3269

Alternate gene names: 170755305

Gene position: 1430286-1432382 (Clockwise)

Preceding gene: 170756797

Following gene: 170756354

Centisome position: 36.13

GC content: 25.61

Gene sequence:

>2097_bases
ATGAAGAAGAATTTAAGAATAATAATAATTATTATAATGGTTTTCCTAGGAAATATTATAAGTGGACAAAATGTAGTGGC
GGCTCCAAATAAATCTAAAAATTTTAGAGTAGAAAAAGATATGAAGATAGAGGGGGTATTTGGAAATAATGTATTTTTCT
TTAACATAGATAAAAGTTGGACAGTAGATAATGCCTATTTAAACTTAATTTTTACAGAGAGTGATCTTTTAGATAAAACT
CAATCTACATTAACAGCTTATATAAATGATTTCCCAGTATATTCTATGAAGATCGGAGATAAAAAGAAATATAAAGAATC
CATAAAAATTAATATACCAAAGGATAAATTGATATCTGGGTATAATGAAGTTAAAATTAAAGTTTATAGTAGAATATCAG
AAAAACCCTGTATAGATGATGTAAATAGTGGGAATTGGTTTATAATTCACAAAGGTTCTTATGTTCATATGGATTTTAAG
GATAGAGAAGATACAAAAACTCTTAAAGAATTTCCTTTCCCCTATTTAAAAGCCAGTGACGAAAATCCAGCTAACAGTAT
GATTATGCTTCCGGATAATTTTTCGCAGGGAGAAATCACATCTACTATGATGCTTTGTTCTAATTTTGGATCAAAAAGAA
AATCTGATAATGTAAATATGAAAGTTTATAAAGCTTCAGAGGCTAATTTAAAAAACAAATTAGATATAATTTTTATAGGA
AGTAAAAATAATACTCCCCTAGATTTGTTAACTTTACTGTCCAAAGAAGAGATAAATAGGCTAGATAAAGATGCTATTGT
TAAAGAGGTTATTTCACCCTATAATCCTAGTAAAAAGCTATTGCTTTTAATATCTAATAATGAAAAGAATATGATAAAGG
CTTCAAAATTATTATGTAGTAAAGACTATATGAAGCAAATAGATAAAGACACTATAATAGTTAATAATAGTATGGATGTA
GAAGATATAAAAGAAGAAAAAGCGAATAGAGTATCATTGTCAGATTTAGGATATGGCAATGTAAGTTTAAAAGGACCTTT
TAAACAGGAGGCAACCTTTAATTTGAATATTCCCAAAGATAGATTTATAAAAGAGGGATCAAAGGTAGTTATAAATAATA
GATATTCTAAAAATATAGATTTTGATAGATCTCTTATAACGGTTTATATAAATGATACTCCAATAGGTAGTAAAAAATTA
GACAGCAAAACAGCGGATAATGATAGCTTTGAAATAAGTATTCCAAAAGATATTAGAAATAGTAGCAATTATGAAATAAA
GGTAGTGTTTAATTTAGAAATTAAAGATTTATTTTGTACTTTTAGAGAGGGCGAAAATCCTTGGGCTTATATATTAAATA
ATTCTTACATTTATACCCCTTATAAAGAGGGTAGGGATAATGTATTTGAAAATTATCCTAATCCATTTATATCTAATGGA
GGTATGAATGATTTGACATTAGTACTTTCAGATAATACTACTTCTGAAGAACTTAATTTTGCAGGAAATATAATGGCTAC
CATAGGGCATGATGTAGATATCAATAGGGGTAAATTTAATGCAGTAGCAGCAAAGGATTTATCATCTAAACTTAAGAAGG
GTAATTTAATAATCATAGGAACACCAGAGAGCAATTCTATTATAAAAAATTTAAATAAAAATTTATATATTAAATTTAAC
AAGAATTTTAATGGATTTCTATCCAATGAGAAAATGAAATTTTTTCAGGATTATAGTAGCAAGTTAGCCTCTATTCAACT
TATAGACTCTCCTTATAATAAAGAGAACAAAGCAATGATAGTAACATCAACTTATACTAGAGATTTAGCTTTAGCACAAA
AATATTTAAGTGATATATCTTTAGTAAAAAGTCTTAAAGGAAATGCTGTAACTATAGATAGAGATGGTTTAATGAATTAT
TCATATTTTGGAGATAAATATGATAAAGAAAAAGAAGAAAATGGTAATATCAGTAAATTTAAAAATATAACTTTAAATTC
TAATATAAAAAACTTACTAATATTTTTTGTGTTTATAATGGTTATTTTAGTTGTAGGTTCTTTATTATTTATAAAAAAAT
ATAAAAAAAATAGTTAG

Upstream 100 bases:

>100_bases
AACTTAAGCAGATGAATCCTGTGGTACTACCGTCTTATAAGTTGGAAAAATGAAAAATCATAGCTGCTATTTGTTATGAT
TTTAGAAATCAGGAGTTAAT

Downstream 100 bases:

>100_bases
GATATATTATTACTAGTACAATAATTAAAATAACTTAATAAACAGAGTTCTTGGTTTTAGAGGGAGTTTTTACTCCCACT
AAAGCTTATTAACAGACTTC

Product: cellulose synthase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKKNLRIIIIIIMVFLGNIISGQNVVAAPNKSKNFRVEKDMKIEGVFGNNVFFFNIDKSWTVDNAYLNLIFTESDLLDKT
QSTLTAYINDFPVYSMKIGDKKKYKESIKINIPKDKLISGYNEVKIKVYSRISEKPCIDDVNSGNWFIIHKGSYVHMDFK
DREDTKTLKEFPFPYLKASDENPANSMIMLPDNFSQGEITSTMMLCSNFGSKRKSDNVNMKVYKASEANLKNKLDIIFIG
SKNNTPLDLLTLLSKEEINRLDKDAIVKEVISPYNPSKKLLLLISNNEKNMIKASKLLCSKDYMKQIDKDTIIVNNSMDV
EDIKEEKANRVSLSDLGYGNVSLKGPFKQEATFNLNIPKDRFIKEGSKVVINNRYSKNIDFDRSLITVYINDTPIGSKKL
DSKTADNDSFEISIPKDIRNSSNYEIKVVFNLEIKDLFCTFREGENPWAYILNNSYIYTPYKEGRDNVFENYPNPFISNG
GMNDLTLVLSDNTTSEELNFAGNIMATIGHDVDINRGKFNAVAAKDLSSKLKKGNLIIIGTPESNSIIKNLNKNLYIKFN
KNFNGFLSNEKMKFFQDYSSKLASIQLIDSPYNKENKAMIVTSTYTRDLALAQKYLSDISLVKSLKGNAVTIDRDGLMNY
SYFGDKYDKEKEENGNISKFKNITLNSNIKNLLIFFVFIMVILVVGSLLFIKKYKKNS

Sequences:

>Translated_698_residues
MKKNLRIIIIIIMVFLGNIISGQNVVAAPNKSKNFRVEKDMKIEGVFGNNVFFFNIDKSWTVDNAYLNLIFTESDLLDKT
QSTLTAYINDFPVYSMKIGDKKKYKESIKINIPKDKLISGYNEVKIKVYSRISEKPCIDDVNSGNWFIIHKGSYVHMDFK
DREDTKTLKEFPFPYLKASDENPANSMIMLPDNFSQGEITSTMMLCSNFGSKRKSDNVNMKVYKASEANLKNKLDIIFIG
SKNNTPLDLLTLLSKEEINRLDKDAIVKEVISPYNPSKKLLLLISNNEKNMIKASKLLCSKDYMKQIDKDTIIVNNSMDV
EDIKEEKANRVSLSDLGYGNVSLKGPFKQEATFNLNIPKDRFIKEGSKVVINNRYSKNIDFDRSLITVYINDTPIGSKKL
DSKTADNDSFEISIPKDIRNSSNYEIKVVFNLEIKDLFCTFREGENPWAYILNNSYIYTPYKEGRDNVFENYPNPFISNG
GMNDLTLVLSDNTTSEELNFAGNIMATIGHDVDINRGKFNAVAAKDLSSKLKKGNLIIIGTPESNSIIKNLNKNLYIKFN
KNFNGFLSNEKMKFFQDYSSKLASIQLIDSPYNKENKAMIVTSTYTRDLALAQKYLSDISLVKSLKGNAVTIDRDGLMNY
SYFGDKYDKEKEENGNISKFKNITLNSNIKNLLIFFVFIMVILVVGSLLFIKKYKKNS
>Mature_698_residues
MKKNLRIIIIIIMVFLGNIISGQNVVAAPNKSKNFRVEKDMKIEGVFGNNVFFFNIDKSWTVDNAYLNLIFTESDLLDKT
QSTLTAYINDFPVYSMKIGDKKKYKESIKINIPKDKLISGYNEVKIKVYSRISEKPCIDDVNSGNWFIIHKGSYVHMDFK
DREDTKTLKEFPFPYLKASDENPANSMIMLPDNFSQGEITSTMMLCSNFGSKRKSDNVNMKVYKASEANLKNKLDIIFIG
SKNNTPLDLLTLLSKEEINRLDKDAIVKEVISPYNPSKKLLLLISNNEKNMIKASKLLCSKDYMKQIDKDTIIVNNSMDV
EDIKEEKANRVSLSDLGYGNVSLKGPFKQEATFNLNIPKDRFIKEGSKVVINNRYSKNIDFDRSLITVYINDTPIGSKKL
DSKTADNDSFEISIPKDIRNSSNYEIKVVFNLEIKDLFCTFREGENPWAYILNNSYIYTPYKEGRDNVFENYPNPFISNG
GMNDLTLVLSDNTTSEELNFAGNIMATIGHDVDINRGKFNAVAAKDLSSKLKKGNLIIIGTPESNSIIKNLNKNLYIKFN
KNFNGFLSNEKMKFFQDYSSKLASIQLIDSPYNKENKAMIVTSTYTRDLALAQKYLSDISLVKSLKGNAVTIDRDGLMNY
SYFGDKYDKEKEENGNISKFKNITLNSNIKNLLIFFVFIMVILVVGSLLFIKKYKKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789952, Length=394, Percent_Identity=24.8730964467005, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018513 [H]

Pfam domain/function: PF03170 BcsB [H]

EC number: NA

Molecular weight: Translated: 79590; Mature: 79590

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLRIIIIIIMVFLGNIISGQNVVAAPNKSKNFRVEKDMKIEGVFGNNVFFFNIDKSW
CCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCEEEEEECCCEEEEECCCCE
TVDNAYLNLIFTESDLLDKTQSTLTAYINDFPVYSMKIGDKKKYKESIKINIPKDKLISG
EECCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCEEEECCHHHHHCC
YNEVKIKVYSRISEKPCIDDVNSGNWFIIHKGSYVHMDFKDREDTKTLKEFPFPYLKASD
CCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHCCCCEEECCC
ENPANSMIMLPDNFSQGEITSTMMLCSNFGSKRKSDNVNMKVYKASEANLKNKLDIIFIG
CCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE
SKNNTPLDLLTLLSKEEINRLDKDAIVKEVISPYNPSKKLLLLISNNEKNMIKASKLLCS
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHC
KDYMKQIDKDTIIVNNSMDVEDIKEEKANRVSLSDLGYGNVSLKGPFKQEATFNLNIPKD
HHHHHHCCCCEEEEECCCCHHHHHHHHCCEEEEHHCCCCCEEECCCCCCCCEEEECCCHH
RFIKEGSKVVINNRYSKNIDFDRSLITVYINDTPIGSKKLDSKTADNDSFEISIPKDIRN
HHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHCC
SSNYEIKVVFNLEIKDLFCTFREGENPWAYILNNSYIYTPYKEGRDNVFENYPNPFISNG
CCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCEEECCCCCCCCHHHHCCCCCCCCCC
GMNDLTLVLSDNTTSEELNFAGNIMATIGHDVDINRGKFNAVAAKDLSSKLKKGNLIIIG
CCCEEEEEEECCCCCCHHCCCCCEEEEECCCEECCCCCEEEEHHHHHHHHHCCCCEEEEE
TPESNSIIKNLNKNLYIKFNKNFNGFLSNEKMKFFQDYSSKLASIQLIDSPYNKENKAMI
CCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCEEE
VTSTYTRDLALAQKYLSDISLVKSLKGNAVTIDRDGLMNYSYFGDKYDKEKEENGNISKF
EEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCCCCHHCCCCHHHE
KNITLNSNIKNLLIFFVFIMVILVVGSLLFIKKYKKNS
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKNLRIIIIIIMVFLGNIISGQNVVAAPNKSKNFRVEKDMKIEGVFGNNVFFFNIDKSW
CCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCEEEEEECCCEEEEECCCCE
TVDNAYLNLIFTESDLLDKTQSTLTAYINDFPVYSMKIGDKKKYKESIKINIPKDKLISG
EECCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCEEEECCHHHHHCC
YNEVKIKVYSRISEKPCIDDVNSGNWFIIHKGSYVHMDFKDREDTKTLKEFPFPYLKASD
CCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHCCCCEEECCC
ENPANSMIMLPDNFSQGEITSTMMLCSNFGSKRKSDNVNMKVYKASEANLKNKLDIIFIG
CCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE
SKNNTPLDLLTLLSKEEINRLDKDAIVKEVISPYNPSKKLLLLISNNEKNMIKASKLLCS
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHC
KDYMKQIDKDTIIVNNSMDVEDIKEEKANRVSLSDLGYGNVSLKGPFKQEATFNLNIPKD
HHHHHHCCCCEEEEECCCCHHHHHHHHCCEEEEHHCCCCCEEECCCCCCCCEEEECCCHH
RFIKEGSKVVINNRYSKNIDFDRSLITVYINDTPIGSKKLDSKTADNDSFEISIPKDIRN
HHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHCC
SSNYEIKVVFNLEIKDLFCTFREGENPWAYILNNSYIYTPYKEGRDNVFENYPNPFISNG
CCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCEEECCCCCCCCHHHHCCCCCCCCCC
GMNDLTLVLSDNTTSEELNFAGNIMATIGHDVDINRGKFNAVAAKDLSSKLKKGNLIIIG
CCCEEEEEEECCCCCCHHCCCCCEEEEECCCEECCCCCEEEEHHHHHHHHHCCCCEEEEE
TPESNSIIKNLNKNLYIKFNKNFNGFLSNEKMKFFQDYSSKLASIQLIDSPYNKENKAMI
CCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCEEE
VTSTYTRDLALAQKYLSDISLVKSLKGNAVTIDRDGLMNYSYFGDKYDKEKEENGNISKF
EEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCCCCHHCCCCHHHE
KNITLNSNIKNLLIFFVFIMVILVVGSLLFIKKYKKNS
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]