Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755293

Identifier: 170755293

GI number: 170755293

Start: 3219505

End: 3219987

Strand: Reverse

Name: 170755293

Synonym: CLD_1575

Alternate gene names: NA

Gene position: 3219987-3219505 (Counterclockwise)

Preceding gene: 170754324

Following gene: 170756362

Centisome position: 81.35

GC content: 22.36

Gene sequence:

>483_bases
ATGGAAAAACCATTAATTTATTATGCTATTTCAGTTTTTTTGGGGTGTATTTCTGCCTTGTTATTATTTAATAATATATT
ATTAGGTGCAGTGTTTACTGCATCTTTTTTAATAATTATTTTTATAAATGAGGATAGCAAAAATTTTATTATAATTTTAT
TATTTTTTATTTTGGCTATGTTTAGTTTTTACAGTTATTTCACTATAGATGTTCCAGATAATATTAAAGTTAGGATTACA
AAAAAAGAAAAATATTATTGTTTTGGAGAATATAAGGGAAGAAATATTTTTATAATAGGGAAGACTAAAGATTTAAAAGA
AGGGCTGAAAACTACCATAGAGGGTGAATTTACAAAAGATATTAGATATAGGGGTGGATCTTTGGGAAGTTTTAAAGTAA
AAAAAGTAAAAGGAAAAGAAGAAGATATAGTATACAATATATATAATTTTAAATCTATAGCATATATAATTTTAAATCTA
TAG

Upstream 100 bases:

>100_bases
AAAGAAATAAAAAAGATGCTGAAGTTATGAATATAGAATATAATGAATATACGAAAAGTGTTCAAATAGTAGCAAAACTT
CAAAGTTAAGGAGATAGTTT

Downstream 100 bases:

>100_bases
CCTATAATGAATTTAAGGAACAGTTAGGAGAAAATAAGACTGCTATGATAATGTCTTTATGCTTTGGAGAAACTAAATAT
ATATCTAATAGTGATAAAGA

Product: ComEC/Rec2 family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MEKPLIYYAISVFLGCISALLLFNNILLGAVFTASFLIIIFINEDSKNFIIILLFFILAMFSFYSYFTIDVPDNIKVRIT
KKEKYYCFGEYKGRNIFIIGKTKDLKEGLKTTIEGEFTKDIRYRGGSLGSFKVKKVKGKEEDIVYNIYNFKSIAYIILNL

Sequences:

>Translated_160_residues
MEKPLIYYAISVFLGCISALLLFNNILLGAVFTASFLIIIFINEDSKNFIIILLFFILAMFSFYSYFTIDVPDNIKVRIT
KKEKYYCFGEYKGRNIFIIGKTKDLKEGLKTTIEGEFTKDIRYRGGSLGSFKVKKVKGKEEDIVYNIYNFKSIAYIILNL
>Mature_160_residues
MEKPLIYYAISVFLGCISALLLFNNILLGAVFTASFLIIIFINEDSKNFIIILLFFILAMFSFYSYFTIDVPDNIKVRIT
KKEKYYCFGEYKGRNIFIIGKTKDLKEGLKTTIEGEFTKDIRYRGGSLGSFKVKKVKGKEEDIVYNIYNFKSIAYIILNL

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18521; Mature: 18521

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPLIYYAISVFLGCISALLLFNNILLGAVFTASFLIIIFINEDSKNFIIILLFFILAM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHH
FSFYSYFTIDVPDNIKVRITKKEKYYCFGEYKGRNIFIIGKTKDLKEGLKTTIEGEFTKD
HHHHHEEEEECCCCEEEEEEECCEEEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCH
IRYRGGSLGSFKVKKVKGKEEDIVYNIYNFKSIAYIILNL
HHCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEC
>Mature Secondary Structure
MEKPLIYYAISVFLGCISALLLFNNILLGAVFTASFLIIIFINEDSKNFIIILLFFILAM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHH
FSFYSYFTIDVPDNIKVRITKKEKYYCFGEYKGRNIFIIGKTKDLKEGLKTTIEGEFTKD
HHHHHEEEEECCCCEEEEEEECCEEEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCH
IRYRGGSLGSFKVKKVKGKEEDIVYNIYNFKSIAYIILNL
HHCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA