| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is thiG [C]
Identifier: 170755290
GI number: 170755290
Start: 3916428
End: 3917354
Strand: Reverse
Name: thiG [C]
Synonym: CLD_0884
Alternate gene names: 170755290
Gene position: 3917354-3916428 (Counterclockwise)
Preceding gene: 170756859
Following gene: 170755402
Centisome position: 98.97
GC content: 36.57
Gene sequence:
>927_bases ATGAACAAATCCATATTTTCTCATATGGTTGGAATAAAATATCCTATTATTCAAGGCGGGATGGCGTGGATTGCTGATAG TTCATTAGCAGCAGCAGTTTCTAATGCAGGAGGTCTTGGAATAATAACAGGAAATGCACCAGTTGAGTGGGTTAGACAAG AAATAAGAAAGGCAAAAGAATTAACAGATAAGCCCTTTGGAGTAAATATAATGCTTTTAGCAGAAACAGCGGACGAGATA GCTCAAATGGTTTGTGATGAGGGTGTAAAAGTAGTTACTACTGGAGCAGGTAATCCAGGAAAGTATATAAAGAAATGGAA AGAGCATGGGATAATTGTTATACCTGTAGTTGCTTCTGTGGCTTTGGCTAAGAGAATGGAAAAATCAGGGGTAGATGCCA TAATAGCAGAAGGTTGTGAATCCGGTGGTCATGTAGGTGAATTAACAACAATGGCATTGATGCCACAGGTTGTTGATGCT GTAAATATACCTGTTATAGCAGCCGGAGGAATAGGTGATGGAAGAGGTATAGCAGCTAGTTTTATGTTAGGAGCAGATGC TGTTCAAGTAGGTACTAGATTTTTAGTAGCAAAAGAATGTACTGTTCACGAAAATTATAAAAATAAAGTTATGAAAGCTA AGGATATAGATACACAAGTTACAGGTAGGGCAACAGGTCATCCTGTTAGGATCATAAGAAACAAGTTATCTAGAAAGTTC CAACTATTAGAAAAAGAAGGTGCGCCTTTAGAGGAATTTGAAAACCTAGGTAAAGGAGCATTAAGTAAAGCTGTAAGAGA TGGAGATATTGACAATGGTTCTGTTATGGCAGGTCAAATTGCAGGACTTATAAATAAGGAACAAACTTGTAGTGAAATTA TAAATGAAATGTTTAATGAAGCCTATACACTATTAGGTTATAAATAA
Upstream 100 bases:
>100_bases ATCTATGATGGTCCCTAAAATTAAAAGGCAATTTAATTTTAGCATATAAACATTTAATAATAAACTATTTATTTAAGATT TCTAGGGAGGAATTAAAACT
Downstream 100 bases:
>100_bases TATTTATTTTGGAGGATACTATGTCAAAGATAGCTTTTATATTCTCAGGTCAAGGAGCTCAATATGTAGGTATGGGTAAG GAGTTATATGAAAGTATTCC
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKELTDKPFGVNIMLLAETADEI AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASVALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDA VNIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGYK
Sequences:
>Translated_308_residues MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKELTDKPFGVNIMLLAETADEI AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASVALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDA VNIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGYK >Mature_308_residues MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKELTDKPFGVNIMLLAETADEI AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASVALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDA VNIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGYK
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=173, Percent_Identity=28.9017341040462, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 32750; Mature: 32750
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKE CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH LTDKPFGVNIMLLAETADEIAQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASV HCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEHHHHHH ALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDAVNIPVIAAGGIGDGRGIAAS HHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH FMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF HHHCCHHHHHHHHHEEEECCHHHHHHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE HHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH AYTLLGYK HHHHHCCC >Mature Secondary Structure MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKE CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH LTDKPFGVNIMLLAETADEIAQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASV HCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEHHHHHH ALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDAVNIPVIAAGGIGDGRGIAAS HHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH FMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF HHHCCHHHHHHHHHEEEECCHHHHHHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE HHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH AYTLLGYK HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]