Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is thiG [C]

Identifier: 170755290

GI number: 170755290

Start: 3916428

End: 3917354

Strand: Reverse

Name: thiG [C]

Synonym: CLD_0884

Alternate gene names: 170755290

Gene position: 3917354-3916428 (Counterclockwise)

Preceding gene: 170756859

Following gene: 170755402

Centisome position: 98.97

GC content: 36.57

Gene sequence:

>927_bases
ATGAACAAATCCATATTTTCTCATATGGTTGGAATAAAATATCCTATTATTCAAGGCGGGATGGCGTGGATTGCTGATAG
TTCATTAGCAGCAGCAGTTTCTAATGCAGGAGGTCTTGGAATAATAACAGGAAATGCACCAGTTGAGTGGGTTAGACAAG
AAATAAGAAAGGCAAAAGAATTAACAGATAAGCCCTTTGGAGTAAATATAATGCTTTTAGCAGAAACAGCGGACGAGATA
GCTCAAATGGTTTGTGATGAGGGTGTAAAAGTAGTTACTACTGGAGCAGGTAATCCAGGAAAGTATATAAAGAAATGGAA
AGAGCATGGGATAATTGTTATACCTGTAGTTGCTTCTGTGGCTTTGGCTAAGAGAATGGAAAAATCAGGGGTAGATGCCA
TAATAGCAGAAGGTTGTGAATCCGGTGGTCATGTAGGTGAATTAACAACAATGGCATTGATGCCACAGGTTGTTGATGCT
GTAAATATACCTGTTATAGCAGCCGGAGGAATAGGTGATGGAAGAGGTATAGCAGCTAGTTTTATGTTAGGAGCAGATGC
TGTTCAAGTAGGTACTAGATTTTTAGTAGCAAAAGAATGTACTGTTCACGAAAATTATAAAAATAAAGTTATGAAAGCTA
AGGATATAGATACACAAGTTACAGGTAGGGCAACAGGTCATCCTGTTAGGATCATAAGAAACAAGTTATCTAGAAAGTTC
CAACTATTAGAAAAAGAAGGTGCGCCTTTAGAGGAATTTGAAAACCTAGGTAAAGGAGCATTAAGTAAAGCTGTAAGAGA
TGGAGATATTGACAATGGTTCTGTTATGGCAGGTCAAATTGCAGGACTTATAAATAAGGAACAAACTTGTAGTGAAATTA
TAAATGAAATGTTTAATGAAGCCTATACACTATTAGGTTATAAATAA

Upstream 100 bases:

>100_bases
ATCTATGATGGTCCCTAAAATTAAAAGGCAATTTAATTTTAGCATATAAACATTTAATAATAAACTATTTATTTAAGATT
TCTAGGGAGGAATTAAAACT

Downstream 100 bases:

>100_bases
TATTTATTTTGGAGGATACTATGTCAAAGATAGCTTTTATATTCTCAGGTCAAGGAGCTCAATATGTAGGTATGGGTAAG
GAGTTATATGAAAGTATTCC

Product: 2-nitropropane dioxygenase family oxidoreductase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKELTDKPFGVNIMLLAETADEI
AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASVALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDA
VNIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF
QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGYK

Sequences:

>Translated_308_residues
MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKELTDKPFGVNIMLLAETADEI
AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASVALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDA
VNIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF
QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGYK
>Mature_308_residues
MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKELTDKPFGVNIMLLAETADEI
AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASVALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDA
VNIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF
QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGYK

Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=173, Percent_Identity=28.9017341040462, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 32750; Mature: 32750

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKE
CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LTDKPFGVNIMLLAETADEIAQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASV
HCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEHHHHHH
ALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDAVNIPVIAAGGIGDGRGIAAS
HHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
FMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF
HHHCCHHHHHHHHHEEEECCHHHHHHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH
QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE
HHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
AYTLLGYK
HHHHHCCC
>Mature Secondary Structure
MNKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKAKE
CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LTDKPFGVNIMLLAETADEIAQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVASV
HCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEHHHHHH
ALAKRMEKSGVDAIIAEGCESGGHVGELTTMALMPQVVDAVNIPVIAAGGIGDGRGIAAS
HHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
FMLGADAVQVGTRFLVAKECTVHENYKNKVMKAKDIDTQVTGRATGHPVRIIRNKLSRKF
HHHCCHHHHHHHHHEEEECCHHHHHHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH
QLLEKEGAPLEEFENLGKGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE
HHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
AYTLLGYK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]