Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755283

Identifier: 170755283

GI number: 170755283

Start: 2839972

End: 2840409

Strand: Reverse

Name: 170755283

Synonym: CLD_1905

Alternate gene names: NA

Gene position: 2840409-2839972 (Counterclockwise)

Preceding gene: 170756099

Following gene: 170754640

Centisome position: 71.76

GC content: 23.52

Gene sequence:

>438_bases
ATGAAGGGATATTCCTTTAGACTTCAAAAACTTTTAGATATAAGAGAAAAAAAAGAAGAAGAAAGTAAAATGAAGTTTAA
GCAGGCTCAAATGGAAAAAAATCATACAGAAGAAAAACTATTTAAATTAAAAAATAATTATAGTAAATACAATAACATAA
ATTTAAATGACTCTATACTAGAAAAAAAAATAAGGCATAGTTATTTAAATTCTTTAAATTTTTGCATAAATGAAACAGCA
AATGAATTGAAGCAAAAACTTAAAATAGTAGAGGAAAGAAGAGAAGAATTAAAAACAAAACAATTAGAAAGAAAAACTGT
AGAAATTTTAAAAGAAAAGGATAAATTAGCCTTTGAAAAGGAACAAAATATGATAGAGCAAAGAAATAATGATGAATTTG
CTCTCTATGCATTTATAAGAAATGCTGAAAGGAGGTGA

Upstream 100 bases:

>100_bases
TACCTTTTATTAATTTAATAGTATAAAGAATTTATAAGTAAAATTAATACGTTTAATTTAATAATATATTTTTGAATTTT
GAAAGAAGGCAGGTAATTTA

Downstream 100 bases:

>100_bases
GAAATGTGGAATTGAAAATAAGTGGATTTACTAAAATAGAAAATAATTCATCTACTAAGAAGCCTACTAGTCAAAGTGAA
AAATCTTATTCTTTTAATGA

Product: flagellar protein FliJ

Products: NA

Alternate protein names: Flagellar Protein FliJ; Flagellar Biosynthesis Chaperone FliJ

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKGYSFRLQKLLDIREKKEEESKMKFKQAQMEKNHTEEKLFKLKNNYSKYNNINLNDSILEKKIRHSYLNSLNFCINETA
NELKQKLKIVEERREELKTKQLERKTVEILKEKDKLAFEKEQNMIEQRNNDEFALYAFIRNAERR

Sequences:

>Translated_145_residues
MKGYSFRLQKLLDIREKKEEESKMKFKQAQMEKNHTEEKLFKLKNNYSKYNNINLNDSILEKKIRHSYLNSLNFCINETA
NELKQKLKIVEERREELKTKQLERKTVEILKEKDKLAFEKEQNMIEQRNNDEFALYAFIRNAERR
>Mature_145_residues
MKGYSFRLQKLLDIREKKEEESKMKFKQAQMEKNHTEEKLFKLKNNYSKYNNINLNDSILEKKIRHSYLNSLNFCINETA
NELKQKLKIVEERREELKTKQLERKTVEILKEKDKLAFEKEQNMIEQRNNDEFALYAFIRNAERR

Specific function: Unknown

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17752; Mature: 17752

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGYSFRLQKLLDIREKKEEESKMKFKQAQMEKNHTEEKLFKLKNNYSKYNNINLNDSIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH
EKKIRHSYLNSLNFCINETANELKQKLKIVEERREELKTKQLERKTVEILKEKDKLAFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQNMIEQRNNDEFALYAFIRNAERR
HHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKGYSFRLQKLLDIREKKEEESKMKFKQAQMEKNHTEEKLFKLKNNYSKYNNINLNDSIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH
EKKIRHSYLNSLNFCINETANELKQKLKIVEERREELKTKQLERKTVEILKEKDKLAFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQNMIEQRNNDEFALYAFIRNAERR
HHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA