| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755245
Identifier: 170755245
GI number: 170755245
Start: 3285554
End: 3285919
Strand: Reverse
Name: 170755245
Synonym: CLD_1505
Alternate gene names: NA
Gene position: 3285919-3285554 (Counterclockwise)
Preceding gene: 170756153
Following gene: 170755890
Centisome position: 83.01
GC content: 22.4
Gene sequence:
>366_bases ATGGTTAATATGAATAGAGGAAAAATAAGCAAAAATATATATGAACATCTAGAAAAAAAAGACTTATTAAGAGAAATAAA AATATTAAGAATAGGTAAAAATGCTTTTGAAGAAAAACTAGATGAAGTGTATGTATGCACTATAAGGGGATATTATTATA GAAATAATAGTAATATAATTACAACTTCTATGGAAGGACTGGAATTTAATAATTTATATAATGATAAATTATTAATTACC TATAATGATATAAGTTCTAAAATACAAAAGGATGATTATTTTATATTAGATGGAACTAAGTATGAAATAGTTGACACAGG AAATATTCAAAACCTAGTATTTGATATGATATTAAACAGGGTGTGA
Upstream 100 bases:
>100_bases AAAGTAATAGAGCCTATTGGTTAACTCTAGCAGAGCATTTCAAAGAAGAGCAAAAGATTCTAAAGAATCAAACTTCTATG GAAAGAGTTGATGAATATTA
Downstream 100 bases:
>100_bases TGATATGAGTGAATTTGAAGTAAATATAGATAGTGTTATTGATGGATTATCTGAATTTGAGATGCAATCTAAAACTGCTA TAAGTGGGTATGCAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLIT YNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV
Sequences:
>Translated_121_residues MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLIT YNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV >Mature_121_residues MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLIT YNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14345; Mature: 14345
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNII CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCEEEEEEEEEEEEECCCEEE TTSMEGLEFNNLYNDKLLITYNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNR EEECCCEEECCCCCCEEEEEECCCCHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHC V C >Mature Secondary Structure MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNII CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCEEEEEEEEEEEEECCCEEE TTSMEGLEFNNLYNDKLLITYNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNR EEECCCEEECCCCCCEEEEEECCCCHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA