| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755237
Identifier: 170755237
GI number: 170755237
Start: 883962
End: 885098
Strand: Direct
Name: 170755237
Synonym: CLD_3798
Alternate gene names: NA
Gene position: 883962-885098 (Clockwise)
Preceding gene: 170757534
Following gene: 170756063
Centisome position: 22.33
GC content: 24.71
Gene sequence:
>1137_bases ATGACTAAATATATTTGGCAAGAACTTAAAAGAGTATTAATTAAAAAGAAAATTTCACTTATTATTATTCTTATCCTTAC CATAGTTTTTGGTGGAGCAAACATTTTAAAACAAAAAACTTTAGAGGAAAAGCTTGAGCAGAATAAAGTTATTCTTAATA ATCAAATAAACTCTAAAAAAGATGAAAAAACTATAAATAATACAAGAGAACAAATATCTGATATAGAAAAAACCTTAAGT ATGATAAAAGGCTATGATAAATCAAAAATAGATGGAAAAATATTAAAATTAGAAAAAGAAAATAATCCCAAAAATGATAA TGAAATAAAAAAATTAAAATATGAAAAAAAGCACAATATAGACAAAAATGAACTAGTGCCCAAGGGAATCTATGCAACTA TTAATATTTTAGGAGTATCAGATATATCTATATTATATATAATTATTCTAATTGTACTTTTATCTGATATAGTATCAGGG GAATATAGTCCTAACACTATTAAAATGTCCCTTACTAAACCTATATCAAGAAAAAAAATTATAATATCAAAGTTTGCTGT TTCTATAATTATAGGTGCAAGTGTCATAATTATAAGTACAATAATATTTGTAGTAGAGGCTGGAATTCGTTTTGGACTGT CAGATTATAGAATGCCAGTTTATCTAGGGACAAAGTATGTTTTAAATAAATCACTACCTTTAACTGTAGAAACTTCACAA ATGGAGCGCGTAGCAAATAGTATTTCAATAGTTCCTCTTTGGAGTATGATTGTTCGATTCATGTTAATTGCTATACTTGT TTCAATAGTATCTATATCAATACTAATGTTTATATCAACTCTTTGCAAAAGATCACTTATTTCATCTATTATAAATTTTA TATTAGTTATAGTAACATCACTTTTTTATTTGTGGAGATTTAGCGGGGATAATATTCTAGCTAATAAATATGGTGCTTTA TTAAAATTTACGCCTATTCCTTATATGCTTGAAATTTTTGAAGTTTTATCAGGAGGTGTATCTATAAGGCTTGCAAGTAG TATAAACATATTTTTTATTTTAATTGTATGTTTAAGTTGGAGTTTAATTATGATGTTTTTAAGTACTTATATTTTTACAA AGAGAGATTTTGATTAA
Upstream 100 bases:
>100_bases TTAATAGCCTTACATAATGAAGGAGTAAACGTAGAAGGTTTTTCTGAAGTAAAAGAAAAATTAGAGGATAAATTTATAAA AATAGTGGGGGATAATAATA
Downstream 100 bases:
>100_bases AATCATATAAAGTTAGATATACACTAGGTACAAAAGTATCTAGTGTTTTTTTATAGATGTATAGTTTAAGTCATACAAAA TATAAATGGAAATCTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKKDEKTINNTREQISDIEKTLS MIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNIDKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSG EYSPNTIKMSLTKPISRKKIIISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTSLFYLWRFSGDNILANKYGAL LKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSWSLIMMFLSTYIFTKRDFD
Sequences:
>Translated_378_residues MTKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKKDEKTINNTREQISDIEKTLS MIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNIDKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSG EYSPNTIKMSLTKPISRKKIIISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTSLFYLWRFSGDNILANKYGAL LKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSWSLIMMFLSTYIFTKRDFD >Mature_377_residues TKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKKDEKTINNTREQISDIEKTLSM IKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNIDKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSGE YSPNTIKMSLTKPISRKKIIISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQM ERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTSLFYLWRFSGDNILANKYGALL KFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSWSLIMMFLSTYIFTKRDFD
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42994; Mature: 42863
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCH DEKTINNTREQISDIEKTLSMIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC DKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSGEYSPNTIKMSLTKPISRKKI CHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH IISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEEEHHH MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTS HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFYLWRFSGDNILANKYGALLKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSW HHHHHHCCCCCEEHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH SLIMMFLSTYIFTKRDFD HHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCH DEKTINNTREQISDIEKTLSMIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC DKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSGEYSPNTIKMSLTKPISRKKI CHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH IISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEEEHHH MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTS HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFYLWRFSGDNILANKYGALLKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSW HHHHHHCCCCCEEHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH SLIMMFLSTYIFTKRDFD HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA