| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170755149
Identifier: 170755149
GI number: 170755149
Start: 233284
End: 233568
Strand: Reverse
Name: 170755149
Synonym: CLD_0585
Alternate gene names: NA
Gene position: 233568-233284 (Counterclockwise)
Preceding gene: 170754708
Following gene: 170754409
Centisome position: 5.9
GC content: 25.61
Gene sequence:
>285_bases ATGAATCAATGCGATGAATTAGAAGAATTAGTTTCTTCTCAATCCTGGGAAAAAGCATATGGTAAATCCTTAGAATTATT TAATGACTGGCAAGACAACAATTTTGTTATTTCTATGGTTACAAATCATTCAGAAATAGATAATATAAATATTGAATTAT GGAAACTTACCCAATATGTAAAATGTGAGAGTGAAGATGAATCATTAGCTTCTATTCATGCAGTTAAATTTTTATTAGAG CATATTATGCAAATGGAAAAAATAAACATAAAAAATATAGTATAA
Upstream 100 bases:
>100_bases TATTATCAAAAGGAGTATAGCATCATTTATATTATTTTTAATTCTAATTTTTACTCTTGTTAATTATTCATCTAAATTAA ATACTACTTGTAAAAGCTTC
Downstream 100 bases:
>100_bases TATTAATTGATTTTTATATATAAGAGTATACTAATATTATATATATTACTCACAATTCATTTGTTACACTTTTAAAAAAT ATATAAATGAATTATAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MNQCDELEELVSSQSWEKAYGKSLELFNDWQDNNFVISMVTNHSEIDNINIELWKLTQYVKCESEDESLASIHAVKFLLE HIMQMEKINIKNIV
Sequences:
>Translated_94_residues MNQCDELEELVSSQSWEKAYGKSLELFNDWQDNNFVISMVTNHSEIDNINIELWKLTQYVKCESEDESLASIHAVKFLLE HIMQMEKINIKNIV >Mature_94_residues MNQCDELEELVSSQSWEKAYGKSLELFNDWQDNNFVISMVTNHSEIDNINIELWKLTQYVKCESEDESLASIHAVKFLLE HIMQMEKINIKNIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11065; Mature: 11065
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQCDELEELVSSQSWEKAYGKSLELFNDWQDNNFVISMVTNHSEIDNINIELWKLTQYV CCHHHHHHHHHCCCCHHHHHCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHHH KCESEDESLASIHAVKFLLEHIMQMEKINIKNIV HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNQCDELEELVSSQSWEKAYGKSLELFNDWQDNNFVISMVTNHSEIDNINIELWKLTQYV CCHHHHHHHHHCCCCHHHHHCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHHH KCESEDESLASIHAVKFLLEHIMQMEKINIKNIV HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA