| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170755147
Identifier: 170755147
GI number: 170755147
Start: 666874
End: 667323
Strand: Reverse
Name: 170755147
Synonym: CLD_0206
Alternate gene names: NA
Gene position: 667323-666874 (Counterclockwise)
Preceding gene: 170756176
Following gene: 170756133
Centisome position: 16.86
GC content: 27.11
Gene sequence:
>450_bases ATGATCTTTAATATAATAGTTGGTTTTATAATCCCTTGGATCTCCGGTATAGTATTTTATTTTACAGATAGAAAAGTTCT TTTTACTATAGCACCTTTCCAAAGTGTTGTAGCATTTACAGTAAACTCATTCGGATTTTTTTATAAATTTTGGAGCATAT ATCCTCATGAATATAGTAAGTTTGCTAGTATTCCCTACGATTTAGGCATATATCCTATACTTTCAGTTTATTTAATACAT TCCATTAACAAAACAAAACTTAATCCTTACCTACTTATAATGATTGTAACAATTTTTACAACATTTCTTGAATGGCTTGG CATATTAAGTGGGAAAGTACTATATTCAAATGGTTGGAATTTAGGCTTTACTTTTATTAGTTACTTGATACCATACTTAA TAAACTACTGGTTTTATATACAACTGAAAAAAATGAAGATATTTGATTAG
Upstream 100 bases:
>100_bases AAAATTAAACAAAGATATTGGATATACTTATAGTATGTCTTATATATATATTTATTAAAATAATGGATAAAATAATACAA AAATATAATTGGGTGATTTA
Downstream 100 bases:
>100_bases TCTATTTCACCCTCTAAGGAAAGTGCGACGCACTTTTCAGAGTACGGAGTATAGAGTACAGAGAACAGATAATGAAAATA TAATTATGGATTTTACGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MIFNIIVGFIIPWISGIVFYFTDRKVLFTIAPFQSVVAFTVNSFGFFYKFWSIYPHEYSKFASIPYDLGIYPILSVYLIH SINKTKLNPYLLIMIVTIFTTFLEWLGILSGKVLYSNGWNLGFTFISYLIPYLINYWFYIQLKKMKIFD
Sequences:
>Translated_149_residues MIFNIIVGFIIPWISGIVFYFTDRKVLFTIAPFQSVVAFTVNSFGFFYKFWSIYPHEYSKFASIPYDLGIYPILSVYLIH SINKTKLNPYLLIMIVTIFTTFLEWLGILSGKVLYSNGWNLGFTFISYLIPYLINYWFYIQLKKMKIFD >Mature_149_residues MIFNIIVGFIIPWISGIVFYFTDRKVLFTIAPFQSVVAFTVNSFGFFYKFWSIYPHEYSKFASIPYDLGIYPILSVYLIH SINKTKLNPYLLIMIVTIFTTFLEWLGILSGKVLYSNGWNLGFTFISYLIPYLINYWFYIQLKKMKIFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17664; Mature: 17664
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNIIVGFIIPWISGIVFYFTDRKVLFTIAPFQSVVAFTVNSFGFFYKFWSIYPHEYSK CHHHHHHHHHHHHHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHH FASIPYDLGIYPILSVYLIHSINKTKLNPYLLIMIVTIFTTFLEWLGILSGKVLYSNGWN HHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC LGFTFISYLIPYLINYWFYIQLKKMKIFD HHHHHHHHHHHHHHHHHHEEEEEEEECCC >Mature Secondary Structure MIFNIIVGFIIPWISGIVFYFTDRKVLFTIAPFQSVVAFTVNSFGFFYKFWSIYPHEYSK CHHHHHHHHHHHHHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHH FASIPYDLGIYPILSVYLIHSINKTKLNPYLLIMIVTIFTTFLEWLGILSGKVLYSNGWN HHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC LGFTFISYLIPYLINYWFYIQLKKMKIFD HHHHHHHHHHHHHHHHHHEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA