Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755059

Identifier: 170755059

GI number: 170755059

Start: 2957125

End: 2958414

Strand: Reverse

Name: 170755059

Synonym: CLD_1796

Alternate gene names: NA

Gene position: 2958414-2957125 (Counterclockwise)

Preceding gene: 170755731

Following gene: 170754595

Centisome position: 74.74

GC content: 24.42

Gene sequence:

>1290_bases
ATGGAAGATAAATTTATAGATTTAAATTTAAAGTTTAATGAGGAAATAGATAAAAAATCCATACACTCAAATATTTTAGT
TGTAAAAGACACTAGAGGAAATATAGTAACATCTCATATAAAAGTAGAACAAGAGAATATACTTAATATAAAGATAAAAG
CAGATGAGGAATATATTAATAATGAATATACGTTGGAATTCAAAGATTGTATATATTCAAAAAATGGAAATGCTTTTAAA
GAATTAGATAATATAAAATTTTGTTTAAACAAAGGTAAGATCGAAAATAATGGTACAAGGGTAGTAAAGGAAGATAATTG
GATTTATTATAGTGGCAATGAAAAAATTTATACTTATATGGATTATAATCCTCATGGAGAAATAAGAAAAATTAATCTTG
ATGGGTCTTTGAATATAAAACTTTGTGATGACTTTGCAAGTAATATTTGGATAAATGGGCAGTGGCTGTATTACATAAAT
TATAGAGGCAGTAATGAAGAAAATTGTCTTTATAGAATAAAAAAGGATGGAAGTTCAAGAGAACGATTAACCGATACTAC
TATAGATTCTTTAGTCTTCTCAGATAATTACATTTTTTATTCAGAATATATAAGTTCATCTAGTAAGGATAATTATAAAA
TATATAGAATAAAAAAGGATGGATCTAGTAAGATAGCTTTAAGTAATGTAAGAGGTATAAATCTTATAATCCAAGGACCT
TTTTTATATTATTTAAATATAGAGGATAATTATTCTATATATAGAATAAGGGTAGATGGATTAGATATGAAGAAAATAAA
TAATTATTCTAGTAGAAATTTTATGAGAATAAAGGATGGATGGATATATTATATTAACGAAGAACTAGGAAATAACTTGT
ATAGAACAACATTAGATGGAAATTACGAAGAAAAATTAAATAATGATAGTTGTGTAAATGCTATAATGGACAATACTTCT
ATCTATTATGGAAAGGATATAGATAGTAATAAAACTCATTTATATAAAATAAATATAGATGGCTTAGAAAGAAAAAAAAT
ATGTGAAGAAGATTGTTCAAGATCCATGGCTATTACAAGAGATAACATATATTTCTCAGGAAACGATAAGGAAGGAATAT
ATAAAATAAGAAAAGAAGGGGGAAGGGTTTATACTATAACAAAGGAAAATGCTTTAGGATTAGATATAGTAGAAAATTGG
ATTTATTATTACAAACTTAATTTACAGGGACTAAGTATGAAACTACATAGAATAAGTTTATATGATAACAAAAAGCAGGA
AGTTTTATAA

Upstream 100 bases:

>100_bases
TCTTTAGAAAGTATAATTGATAGTGCTTGGAAATGGCACAGATCCCATCCAGATGGATATTAGAATATTAAAGGAATATA
AGGGAGTGTAGCTTGAAATT

Downstream 100 bases:

>100_bases
TAAAATAGTAATATAGTATGTGTAGAATGAAAAAACTCCAAGAATGTAACAAAATAAGGAAAGTGTATAGCACTTTCCTT
ATTTCGTAAAGCTTGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYINNEYTLEFKDCIYSKNGNAFK
ELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYIN
YRGSNEENCLYRIKKDGSSRERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP
FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDGNYEEKLNNDSCVNAIMDNTS
IYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITRDNIYFSGNDKEGIYKIRKEGGRVYTITKENALGLDIVENW
IYYYKLNLQGLSMKLHRISLYDNKKQEVL

Sequences:

>Translated_429_residues
MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYINNEYTLEFKDCIYSKNGNAFK
ELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYIN
YRGSNEENCLYRIKKDGSSRERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP
FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDGNYEEKLNNDSCVNAIMDNTS
IYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITRDNIYFSGNDKEGIYKIRKEGGRVYTITKENALGLDIVENW
IYYYKLNLQGLSMKLHRISLYDNKKQEVL
>Mature_429_residues
MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYINNEYTLEFKDCIYSKNGNAFK
ELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYIN
YRGSNEENCLYRIKKDGSSRERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP
FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDGNYEEKLNNDSCVNAIMDNTS
IYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITRDNIYFSGNDKEGIYKIRKEGGRVYTITKENALGLDIVENW
IYYYKLNLQGLSMKLHRISLYDNKKQEVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50550; Mature: 50550

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYIN
CCCEEEEEEEEECCCCCCHHHCCCEEEEEECCCCEEEEEEEEECCCEEEEEEEECHHHCC
NEYTLEFKDCIYSKNGNAFKELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYM
CEEEEEEHHEEECCCCCHHHHHCCEEEEEECCEECCCCCEEEEECCEEEECCCCEEEEEE
DYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYINYRGSNEENCLYRIKKDGSSR
EECCCCCEEEEECCCEEEEEECCCCCCCEEECCEEEEEEEEECCCCCCEEEEEECCCCCC
ERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP
HHCCCCCHHHEEEECCEEEEEHHHCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECC
FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDG
EEEEEEECCCCEEEEEEECCCCHHHCCCCCCCCEEEEECCEEEEEEHHHCCCEEEEECCC
NYEEKLNNDSCVNAIMDNTSIYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITR
CHHHHCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
DNIYFSGNDKEGIYKIRKEGGRVYTITKENALGLDIVENWIYYYKLNLQGLSMKLHRISL
CEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHHCCEEEEEEEEECEEEEEEEEEEE
YDNKKQEVL
ECCCHHCCC
>Mature Secondary Structure
MEDKFIDLNLKFNEEIDKKSIHSNILVVKDTRGNIVTSHIKVEQENILNIKIKADEEYIN
CCCEEEEEEEEECCCCCCHHHCCCEEEEEECCCCEEEEEEEEECCCEEEEEEEECHHHCC
NEYTLEFKDCIYSKNGNAFKELDNIKFCLNKGKIENNGTRVVKEDNWIYYSGNEKIYTYM
CEEEEEEHHEEECCCCCHHHHHCCEEEEEECCEECCCCCEEEEECCEEEECCCCEEEEEE
DYNPHGEIRKINLDGSLNIKLCDDFASNIWINGQWLYYINYRGSNEENCLYRIKKDGSSR
EECCCCCEEEEECCCEEEEEECCCCCCCEEECCEEEEEEEEECCCCCCEEEEEECCCCCC
ERLTDTTIDSLVFSDNYIFYSEYISSSSKDNYKIYRIKKDGSSKIALSNVRGINLIIQGP
HHCCCCCHHHEEEECCEEEEEHHHCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEEECC
FLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMRIKDGWIYYINEELGNNLYRTTLDG
EEEEEEECCCCEEEEEEECCCCHHHCCCCCCCCEEEEECCEEEEEEHHHCCCEEEEECCC
NYEEKLNNDSCVNAIMDNTSIYYGKDIDSNKTHLYKINIDGLERKKICEEDCSRSMAITR
CHHHHCCCCHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
DNIYFSGNDKEGIYKIRKEGGRVYTITKENALGLDIVENWIYYYKLNLQGLSMKLHRISL
CEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHHCCEEEEEEEEECEEEEEEEEEEE
YDNKKQEVL
ECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA