Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754994

Identifier: 170754994

GI number: 170754994

Start: 3847003

End: 3847401

Strand: Reverse

Name: 170754994

Synonym: CLD_0952

Alternate gene names: NA

Gene position: 3847401-3847003 (Counterclockwise)

Preceding gene: 170756461

Following gene: 170755355

Centisome position: 97.2

GC content: 20.55

Gene sequence:

>399_bases
ATGGTTATATCTATAAGCAAACAATTGGGATTATTAATTTTTAGTTTTCTATCTGGCTTAATAACAGGTGTTTTTTTTGA
TATTTACAGAAGTATAAGGATGGATAAAAATTTAAGCCCTATTATAAAAATTATTGAAGATATATTATTTTGGTGTTTAG
CTGCTATAGTAATATTCATATTTTTGTTATATAATGATTGTGCCTTTATAGGGGTGTATGTATACCTATGGATTGCTATA
GGATTATACATATATATATTTTTTATAAGCAAATATTTAAATCCTATATTTATTTATGTTGTCCAAAACATAAATAAATT
TTTTAGAATATCAATTAATATAATAGTTTATCCCTTTAAAATACTTATATATAAAATAAAATCTAATAAAATGCATTAA

Upstream 100 bases:

>100_bases
TAGTAGGAACTATAAATTCTTGTACTTATCTTAATAATGAATCTAAAGCCAACAGGAGCAATATATTTTCAAAACTATTT
AAGTAGGAGATTTGTATATT

Downstream 100 bases:

>100_bases
TTTTTAATATAATTTGCAAAAATAACTTGAAGAAAATTTTAAATATAATAAAATATAACTATAAGGTTTATATTTTATAA
AGGGAAGTTATATTATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVISISKQLGLLIFSFLSGLITGVFFDIYRSIRMDKNLSPIIKIIEDILFWCLAAIVIFIFLLYNDCAFIGVYVYLWIAI
GLYIYIFFISKYLNPIFIYVVQNINKFFRISINIIVYPFKILIYKIKSNKMH

Sequences:

>Translated_132_residues
MVISISKQLGLLIFSFLSGLITGVFFDIYRSIRMDKNLSPIIKIIEDILFWCLAAIVIFIFLLYNDCAFIGVYVYLWIAI
GLYIYIFFISKYLNPIFIYVVQNINKFFRISINIIVYPFKILIYKIKSNKMH
>Mature_132_residues
MVISISKQLGLLIFSFLSGLITGVFFDIYRSIRMDKNLSPIIKIIEDILFWCLAAIVIFIFLLYNDCAFIGVYVYLWIAI
GLYIYIFFISKYLNPIFIYVVQNINKFFRISINIIVYPFKILIYKIKSNKMH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15604; Mature: 15604

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISISKQLGLLIFSFLSGLITGVFFDIYRSIRMDKNLSPIIKIIEDILFWCLAAIVIFI
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLLYNDCAFIGVYVYLWIAIGLYIYIFFISKYLNPIFIYVVQNINKFFRISINIIVYPFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIYKIKSNKMH
HHHHHHHCCCCC
>Mature Secondary Structure
MVISISKQLGLLIFSFLSGLITGVFFDIYRSIRMDKNLSPIIKIIEDILFWCLAAIVIFI
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLLYNDCAFIGVYVYLWIAIGLYIYIFFISKYLNPIFIYVVQNINKFFRISINIIVYPFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIYKIKSNKMH
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA