| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754984
Identifier: 170754984
GI number: 170754984
Start: 2185865
End: 2186512
Strand: Reverse
Name: 170754984
Synonym: CLD_2588
Alternate gene names: NA
Gene position: 2186512-2185865 (Counterclockwise)
Preceding gene: 170757838
Following gene: 170757450
Centisome position: 55.24
GC content: 22.22
Gene sequence:
>648_bases ATGACTAAAGATAGATTAAAATGTATAATATTAAGTCACAAAAGGATAGCTATTGTAACTATATTATTTGTATTAATTAT TTTATATATTATGTTTTCATTATTAATGAATGGTACAAAAAAATTAAATATAGAACATGAGATTGTAGAAAACTCTAATG GAGTAATGAGAATTTTAATACAAGATAGTTTATCTGAAGATGAAAAAAGAAACTTAATTGATTATTATATAAAGGATTAT CTTAAGAATGGTAGTGAAAATGAAAAAAATATATATTTAGTAGATAAAAATTTTAAAGCCTATAAAGGTGGAATTTATGG AGAAGGATTTTCTAATAAAACTTTTCAAGGAGTAGGTAAATTTAATAAAATTATATTCTTATATTCGAAGGAAGAAAAAA AGCCAACTGACAAAGATTTTTCGATTTCACAGAAATATAATTATTACTTAAAACAAGAGAAAGATAATCCAAAATATAAG TTATCAAAAGAATTTAATGTTTCTATTAATAATATAGAAAATAGTTTGGAGAGGGTAGAGCATTATTCCAGACCATATAT TAAAAGAGAAGGGGTTAAACAATATAAAGCCTCATCTATGCTTCTATTTTTGTTAACAAATAAAGAATATAAAGAAGTAA AGAAGTAG
Upstream 100 bases:
>100_bases CTGGTTGTAGATAGTGTTATGATTTATTTAAATCAAAATAATATAAGAGAGCCATAAAAGATATATTAGTTATTATAAGT TAATTGATAAGGGAGATTTT
Downstream 100 bases:
>100_bases GAATTTTGTCATAAATGTAAACGGGTGACATTACTATTTTATAGGGATGAGTAAGCCACCCGTTTTTAACGGATGCCCAT GACTTTACAGAAGAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTKDRLKCIILSHKRIAIVTILFVLIILYIMFSLLMNGTKKLNIEHEIVENSNGVMRILIQDSLSEDEKRNLIDYYIKDY LKNGSENEKNIYLVDKNFKAYKGGIYGEGFSNKTFQGVGKFNKIIFLYSKEEKKPTDKDFSISQKYNYYLKQEKDNPKYK LSKEFNVSINNIENSLERVEHYSRPYIKREGVKQYKASSMLLFLLTNKEYKEVKK
Sequences:
>Translated_215_residues MTKDRLKCIILSHKRIAIVTILFVLIILYIMFSLLMNGTKKLNIEHEIVENSNGVMRILIQDSLSEDEKRNLIDYYIKDY LKNGSENEKNIYLVDKNFKAYKGGIYGEGFSNKTFQGVGKFNKIIFLYSKEEKKPTDKDFSISQKYNYYLKQEKDNPKYK LSKEFNVSINNIENSLERVEHYSRPYIKREGVKQYKASSMLLFLLTNKEYKEVKK >Mature_214_residues TKDRLKCIILSHKRIAIVTILFVLIILYIMFSLLMNGTKKLNIEHEIVENSNGVMRILIQDSLSEDEKRNLIDYYIKDYL KNGSENEKNIYLVDKNFKAYKGGIYGEGFSNKTFQGVGKFNKIIFLYSKEEKKPTDKDFSISQKYNYYLKQEKDNPKYKL SKEFNVSINNIENSLERVEHYSRPYIKREGVKQYKASSMLLFLLTNKEYKEVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25453; Mature: 25322
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDRLKCIILSHKRIAIVTILFVLIILYIMFSLLMNGTKKLNIEHEIVENSNGVMRILI CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHEEECCCCEEEEEE QDSLSEDEKRNLIDYYIKDYLKNGSENEKNIYLVDKNFKAYKGGIYGEGFSNKTFQGVGK ECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCHHHHCCC FNKIIFLYSKEEKKPTDKDFSISQKYNYYLKQEKDNPKYKLSKEFNVSINNIENSLERVE CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCEECEEHHHHHHHHHHHH HYSRPYIKREGVKQYKASSMLLFLLTNKEYKEVKK HHCCCCHHHHHHHHHHHCCEEEEEEECCHHHHHCC >Mature Secondary Structure TKDRLKCIILSHKRIAIVTILFVLIILYIMFSLLMNGTKKLNIEHEIVENSNGVMRILI CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHEEECCCCEEEEEE QDSLSEDEKRNLIDYYIKDYLKNGSENEKNIYLVDKNFKAYKGGIYGEGFSNKTFQGVGK ECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCHHHHCCC FNKIIFLYSKEEKKPTDKDFSISQKYNYYLKQEKDNPKYKLSKEFNVSINNIENSLERVE CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCEECEEHHHHHHHHHHHH HYSRPYIKREGVKQYKASSMLLFLLTNKEYKEVKK HHCCCCHHHHHHHHHHHCCEEEEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA