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The map label for this gene is yaeB [C]

Identifier: 170754961

GI number: 170754961

Start: 1859039

End: 1859443

Strand: Reverse

Name: yaeB [C]

Synonym: CLD_2888

Alternate gene names: 170754961

Gene position: 1859443-1859039 (Counterclockwise)

Preceding gene: 170756602

Following gene: 170756109

Centisome position: 46.98

GC content: 25.93

Gene sequence:

>405_bases
ATGAATACAATAAAGTTAAACCCTATTGGATATATAAAATCTCCCTTTAAAAATCTTGAAGAGATACCTCCTCAAAATAT
TTATGCAAAGGATAAAAAAGCTTTAATAGAAATAAAAGAAGAATTGGTAGAGGGATTAAAAGATTTGGATAAAAATTCAC
ATATAATAATTCTTTTTTATTTTAATAAATCTAAAGATTTTAATCTTATAACAAAAACTCCTTGGAGTGATGAAAAGAAA
GGTGTGTTTTCTACTAGATCACCTAGAAGACCTAATCCTATAGGCTTATCTATAGTAAAGTTAATAGAAATAGATCATAA
TAAAATAATAATTAAAGGTATAGATATGTTGGATGGTACTCCTGTTCTGGATATAAAGCCCTATTCAGAAGAATTAAACC
CTTAA

Upstream 100 bases:

>100_bases
TATAATAAAAGCTTCTAATGCTTTAAAGCTAAATATTTATCTTATAAAAAAGCCTATTAAAATTGCTAATTCCAAAATAT
ATTGAAAAGGAGAATGAAGT

Downstream 100 bases:

>100_bases
TTACACATAAGATGGTGTCTCAAAATAAAATATATTTTCAGACACCATCTTATATTTAAAATTTAAAAAGTTCTTCAACT
TCATACTCTGCCATATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNTIKLNPIGYIKSPFKNLEEIPPQNIYAKDKKALIEIKEELVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKK
GVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGTPVLDIKPYSEELNP

Sequences:

>Translated_134_residues
MNTIKLNPIGYIKSPFKNLEEIPPQNIYAKDKKALIEIKEELVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKK
GVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGTPVLDIKPYSEELNP
>Mature_134_residues
MNTIKLNPIGYIKSPFKNLEEIPPQNIYAKDKKALIEIKEELVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKK
GVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGTPVLDIKPYSEELNP

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=133, Percent_Identity=39.0977443609023, Blast_Score=92, Evalue=2e-19,
Organism=Escherichia coli, GI1786393, Length=138, Percent_Identity=34.7826086956522, Blast_Score=80, Evalue=4e-17,
Organism=Drosophila melanogaster, GI45552503, Length=132, Percent_Identity=38.6363636363636, Blast_Score=93, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24586408, Length=130, Percent_Identity=39.2307692307692, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 15387; Mature: 15387

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIKLNPIGYIKSPFKNLEEIPPQNIYAKDKKALIEIKEELVEGLKDLDKNSHIIILFY
CCEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
FNKSKDFNLITKTPWSDEKKGVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGT
ECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCC
PVLDIKPYSEELNP
CEEEEECCHHCCCC
>Mature Secondary Structure
MNTIKLNPIGYIKSPFKNLEEIPPQNIYAKDKKALIEIKEELVEGLKDLDKNSHIIILFY
CCEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
FNKSKDFNLITKTPWSDEKKGVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGT
ECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCC
PVLDIKPYSEELNP
CEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]