| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is trxA [H]
Identifier: 170754951
GI number: 170754951
Start: 1391690
End: 1392010
Strand: Direct
Name: trxA [H]
Synonym: CLD_3307
Alternate gene names: 170754951
Gene position: 1391690-1392010 (Clockwise)
Preceding gene: 170755998
Following gene: 170756035
Centisome position: 35.16
GC content: 30.53
Gene sequence:
>321_bases ATGTTAGTAATTGATAAGAAAACTTTTGAAGACGAGGTATTAAAATCAGATGGTTATACGTTAGTAGATTATTTTGGGGA TGGTTGTGTCCCATGCCAAGCTTTAATGCCTGATGTGGAGGAATTATCACAAAAATATGAAGATAAGGTTAAATTCTGCA AATTAAATACTTCTAAGGCTAGAAGACTTGCTATATCTCAAAAAGTTTTAGGGCTTCCAACTATAATCTTATATAAGGAT GGAGAAAAATTAGAAGAAGTAGTTAAAGATGATGCTACAAAAGAAAATATAGAAGCTATGATAAAAAAACACACACTGTA A
Upstream 100 bases:
>100_bases TACTGCAGCTGCAGATGGTGCTATAGCAGCAGTAGAAGCTTATAAATATGTTGAAGATACTTTTTAAATATAAAAAATTT ATTTGAAAGGCGGTTATAAA
Downstream 100 bases:
>100_bases AATTTTAAAGATTATTTAGTCATTTAAAGTGTGTATATAAATATCAAGGAATTTAAAATATAAATAAATTAAGGGAGGAA TTTTAATGAGTCTATTTGAA
Product: thioredoxin family protein
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLVIDKKTFEDEVLKSDGYTLVDYFGDGCVPCQALMPDVEELSQKYEDKVKFCKLNTSKARRLAISQKVLGLPTIILYKD GEKLEEVVKDDATKENIEAMIKKHTL
Sequences:
>Translated_106_residues MLVIDKKTFEDEVLKSDGYTLVDYFGDGCVPCQALMPDVEELSQKYEDKVKFCKLNTSKARRLAISQKVLGLPTIILYKD GEKLEEVVKDDATKENIEAMIKKHTL >Mature_106_residues MLVIDKKTFEDEVLKSDGYTLVDYFGDGCVPCQALMPDVEELSQKYEDKVKFCKLNTSKARRLAISQKVLGLPTIILYKD GEKLEEVVKDDATKENIEAMIKKHTL
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI87082331, Length=75, Percent_Identity=36, Blast_Score=66, Evalue=4e-13,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 12058; Mature: 12058
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIDKKTFEDEVLKSDGYTLVDYFGDGCVPCQALMPDVEELSQKYEDKVKFCKLNTSKA CEEECCCCCHHHHHHCCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHH RRLAISQKVLGLPTIILYKDGEKLEEVVKDDATKENIEAMIKKHTL HHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLVIDKKTFEDEVLKSDGYTLVDYFGDGCVPCQALMPDVEELSQKYEDKVKFCKLNTSKA CEEECCCCCHHHHHHCCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHH RRLAISQKVLGLPTIILYKDGEKLEEVVKDDATKENIEAMIKKHTL HHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8223622; 1995593 [H]