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The map label for this gene is 170754846

Identifier: 170754846

GI number: 170754846

Start: 1322417

End: 1323037

Strand: Direct

Name: 170754846

Synonym: CLD_3374

Alternate gene names: NA

Gene position: 1322417-1323037 (Clockwise)

Preceding gene: 170757503

Following gene: 170754248

Centisome position: 33.41

GC content: 24.48

Gene sequence:

>621_bases
ATGAAGCAAAAAGAAAAAAATAAAATTAGCAGAGATAAAATATTAAATGCGGCTATTATAGAATTTGGCACTAAAGATTA
CGGGAAGGCATCTTTAAATAACATTTGCAACGATAATAATATTTCAAAAGGCCTTATCTATCACTATTACAAAAATAAGG
ATGATTTATTTTTAAGTTGCGTAAAGTATTGTTTTGATCAATTTGTAGATTATATTCAAAGTGAGGAGTTTGATGAAAAT
GATTTTCAAAATATTATTCAAAAACATTTAGATTTAAGATATCGTTTTTTTAAAGAGAATATTTATTTAAGACATATATT
TTTTAATGCAGTTTTACAGGCACCTGTGCATTTAAAACAAGAAATTAAAGATATAAGAAAGAATTTTGATAATGTTAATA
TAAGTAATTATCGATTTGCTTTAAGTAAAATAACACTAAGAGAAGGTATAACAGAAGAAGAAGCAATAGAATACTTTTGG
ATTTTTCAAGAAATGTTCAATGGATATTTTGAAAGCAAAACATATGAGAACTGTGAGTTTAATGGACTAATAAAAGAACA
TGAAATCAAACTTGAAAAAATATTGAATATTATGCTTTATGGCATTGTAAAGGAGGATTGA

Upstream 100 bases:

>100_bases
TTTTTACAAAATAATAACATTTAATTTATTGACTACATGGTTTGCTTTTGATAAAGTTAATACAGACCTAGTGGTCTATA
TTTGTTTTGAGGAGGATATA

Downstream 100 bases:

>100_bases
GAATAATGGTACTCTTAATATTAAGATTATTATTAGCAGTTATAGTTGCTTTTTTCCTAGGTAAATTAATTTCAAAAGTC
AAACTACCCGCTATTTTAGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKQKEKNKISRDKILNAAIIEFGTKDYGKASLNNICNDNNISKGLIYHYYKNKDDLFLSCVKYCFDQFVDYIQSEEFDEN
DFQNIIQKHLDLRYRFFKENIYLRHIFFNAVLQAPVHLKQEIKDIRKNFDNVNISNYRFALSKITLREGITEEEAIEYFW
IFQEMFNGYFESKTYENCEFNGLIKEHEIKLEKILNIMLYGIVKED

Sequences:

>Translated_206_residues
MKQKEKNKISRDKILNAAIIEFGTKDYGKASLNNICNDNNISKGLIYHYYKNKDDLFLSCVKYCFDQFVDYIQSEEFDEN
DFQNIIQKHLDLRYRFFKENIYLRHIFFNAVLQAPVHLKQEIKDIRKNFDNVNISNYRFALSKITLREGITEEEAIEYFW
IFQEMFNGYFESKTYENCEFNGLIKEHEIKLEKILNIMLYGIVKED
>Mature_206_residues
MKQKEKNKISRDKILNAAIIEFGTKDYGKASLNNICNDNNISKGLIYHYYKNKDDLFLSCVKYCFDQFVDYIQSEEFDEN
DFQNIIQKHLDLRYRFFKENIYLRHIFFNAVLQAPVHLKQEIKDIRKNFDNVNISNYRFALSKITLREGITEEEAIEYFW
IFQEMFNGYFESKTYENCEFNGLIKEHEIKLEKILNIMLYGIVKED

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24835; Mature: 24835

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKEKNKISRDKILNAAIIEFGTKDYGKASLNNICNDNNISKGLIYHYYKNKDDLFLSC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH
VKYCFDQFVDYIQSEEFDENDFQNIIQKHLDLRYRFFKENIYLRHIFFNAVLQAPVHLKQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EIKDIRKNFDNVNISNYRFALSKITLREGITEEEAIEYFWIFQEMFNGYFESKTYENCEF
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NGLIKEHEIKLEKILNIMLYGIVKED
CCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQKEKNKISRDKILNAAIIEFGTKDYGKASLNNICNDNNISKGLIYHYYKNKDDLFLSC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH
VKYCFDQFVDYIQSEEFDENDFQNIIQKHLDLRYRFFKENIYLRHIFFNAVLQAPVHLKQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EIKDIRKNFDNVNISNYRFALSKITLREGITEEEAIEYFWIFQEMFNGYFESKTYENCEF
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NGLIKEHEIKLEKILNIMLYGIVKED
CCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA