Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754842

Identifier: 170754842

GI number: 170754842

Start: 2794739

End: 2795413

Strand: Reverse

Name: 170754842

Synonym: CLD_1950

Alternate gene names: NA

Gene position: 2795413-2794739 (Counterclockwise)

Preceding gene: 170756632

Following gene: 170755604

Centisome position: 70.62

GC content: 25.93

Gene sequence:

>675_bases
ATGGTTTCTATAATAGTTCCAGTTTTAAATGAAGAAAAAACTATAGAAAATTTATTGGTAAATTTAAAAAGATTAAAGGG
TGAAAAAGAAATTTTAATTATAGATGGAGGAAGTAAGGATTCTACTACAGATATAGCCTCTCAATATGGTAAAGTTATAA
AAAGTAAAAAGGGTAGATCTAATCAAATGAATTGTGGAGCAAAAGAAGCTAATGGAAATATTCTTTGGTTTGTACATTCA
GATTCTATAGTTCATTATGAAAGCATAGTTGCTATAGAAAAAGCTATAAAAGATGGATATATAGGAGGTGGATTTCCTAT
ATATTTTTGTGATTTAAATAGTTTATTTATGAAATATATATCTAAAACTTCAAATATAAGAGCGGATAAATTTAATATAT
ATTATGGAGATCAAGGAATATTTGTTAAAAAAGATATATTTTTAAATATGGGAGGATATCCATCATTGGATATAATGGAG
GACTTAGAATTTTCTTTTAGATTAAGAAGATTGGGTAAACTTAAGCTTTTACCTTATTATATTGGTACCTCTGGAAGAAG
GTTTAAAAAGGGGGGCCAATTTAAAACACATATTCTAATGCATAAATTAAGAATTTTATATTTTATGGGAGTACCTACAG
AAAAATTAAATAAAATATATCGGGAGGAAAGGTAA

Upstream 100 bases:

>100_bases
GGTGGACTATAACCTATAATTTTTTTTTATATAACAACAAATAAGTATTTGAAAAAATTATAATTAAATTAATACATGAG
ATAAGGGTTGATGAGATTAT

Downstream 100 bases:

>100_bases
TGAATGCACTTATAATAATGACTAGGATACCTGTACCTTATAAGACTAAAACTAGGCTTATGAAAATATTGACAGGGCAG
CAGTGTGCAGATATACATAA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Group Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MVSIIVPVLNEEKTIENLLVNLKRLKGEKEILIIDGGSKDSTTDIASQYGKVIKSKKGRSNQMNCGAKEANGNILWFVHS
DSIVHYESIVAIEKAIKDGYIGGGFPIYFCDLNSLFMKYISKTSNIRADKFNIYYGDQGIFVKKDIFLNMGGYPSLDIME
DLEFSFRLRRLGKLKLLPYYIGTSGRRFKKGGQFKTHILMHKLRILYFMGVPTEKLNKIYREER

Sequences:

>Translated_224_residues
MVSIIVPVLNEEKTIENLLVNLKRLKGEKEILIIDGGSKDSTTDIASQYGKVIKSKKGRSNQMNCGAKEANGNILWFVHS
DSIVHYESIVAIEKAIKDGYIGGGFPIYFCDLNSLFMKYISKTSNIRADKFNIYYGDQGIFVKKDIFLNMGGYPSLDIME
DLEFSFRLRRLGKLKLLPYYIGTSGRRFKKGGQFKTHILMHKLRILYFMGVPTEKLNKIYREER
>Mature_224_residues
MVSIIVPVLNEEKTIENLLVNLKRLKGEKEILIIDGGSKDSTTDIASQYGKVIKSKKGRSNQMNCGAKEANGNILWFVHS
DSIVHYESIVAIEKAIKDGYIGGGFPIYFCDLNSLFMKYISKTSNIRADKFNIYYGDQGIFVKKDIFLNMGGYPSLDIME
DLEFSFRLRRLGKLKLLPYYIGTSGRRFKKGGQFKTHILMHKLRILYFMGVPTEKLNKIYREER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25671; Mature: 25671

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIIVPVLNEEKTIENLLVNLKRLKGEKEILIIDGGSKDSTTDIASQYGKVIKSKKGRS
CEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
NQMNCGAKEANGNILWFVHSDSIVHYESIVAIEKAIKDGYIGGGFPIYFCDLNSLFMKYI
CCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHH
SKTSNIRADKFNIYYGDQGIFVKKDIFLNMGGYPSLDIMEDLEFSFRLRRLGKLKLLPYY
HHCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEE
IGTSGRRFKKGGQFKTHILMHKLRILYFMGVPTEKLNKIYREER
ECCCCCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MVSIIVPVLNEEKTIENLLVNLKRLKGEKEILIIDGGSKDSTTDIASQYGKVIKSKKGRS
CEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
NQMNCGAKEANGNILWFVHSDSIVHYESIVAIEKAIKDGYIGGGFPIYFCDLNSLFMKYI
CCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHH
SKTSNIRADKFNIYYGDQGIFVKKDIFLNMGGYPSLDIMEDLEFSFRLRRLGKLKLLPYY
HHCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEE
IGTSGRRFKKGGQFKTHILMHKLRILYFMGVPTEKLNKIYREER
ECCCCCCCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA