| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is mrp [H]
Identifier: 170754839
GI number: 170754839
Start: 118734
End: 119576
Strand: Direct
Name: mrp [H]
Synonym: CLD_0699
Alternate gene names: 170754839
Gene position: 118734-119576 (Clockwise)
Preceding gene: 170754980
Following gene: 170755680
Centisome position: 3.0
GC content: 32.86
Gene sequence:
>843_bases ATGAGTAATTGTGATAGCTGTGCGAGTAAAGGAACATGTAACAGTGAGGGAAGCTGCTCCAAGGAAACTTTTAAATATGG AAATGCAAAAAATATCATAGGTGTAATTAGTGGAAAAGGTGGAGTAGGGAAATCAACAATAACGGGAATATTAGCTACTA AATTAAGAGAAGAAGGCTATAAAGTAGGCGTATTAGATGGTGATATAACAGGGCCATCTATGCCAAGGTTTTTCGGTATT AGTGATAAAAGAGCAACTATAATTCCAACGGGAGAAAATGAAGAAGTTAAAATAATACCCGTAGAAACCAAAACAGGAAT GAAAGTAATGTCTTTAAATTTATTAACAGAACAAGAAGAAGCTCCTGTTATATGGAGAGGACCTGTAATAACAGGAGTTC TGACTCAAATGTATACTGATACTGAGTGGGGTGAACTAGATTACTTACTTATAGATATGCCTCCGGGAACTGGTGACATA GCATTAACTGTAATGCAAAGTTTACCTGTCACAAATATGGTGGTTGTTTCTACACCTCAAGATATGGTTTCTATGATAGT TAAGAAAGTAGTTATAATGATAGAAAAAATGGGAATAGAGGTTTTAGGCGTAGTAGAAAATATGTCTTATATAAAATGTG GAAGTTGTGGAGAAAAGCTAAATGTATTTAGTAAAAAGTCAGCAGAAGAACAAGCAGAATATCTAAATATACCACTAATA GCAGATATGCCCATAAATCTTGATTTGTCTGAGGAAATGGAAAAGGGAGAAGTAGAGACATTTATTATAAATAATGAGGA ATATGCTCAATTATATAATAACTTTAAAAATTTATATAAATAA
Upstream 100 bases:
>100_bases TGCATTAAGATATGAATAAAGTTTAGGGCATTTGCTTATAACCTTATAAGTGATATAATTACACTATGAATTTACTTTGA AATATATAGGAGGTTTTTTA
Downstream 100 bases:
>100_bases TAATAAGGCTTCAATGAATATTCATTGAGGCCTTATTATTATTTATATTTAAAATATAGTTATGTTATCTTAGGAATAAA AAAACTATAAAAGTTCAATA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSNCDSCASKGTCNSEGSCSKETFKYGNAKNIIGVISGKGGVGKSTITGILATKLREEGYKVGVLDGDITGPSMPRFFGI SDKRATIIPTGENEEVKIIPVETKTGMKVMSLNLLTEQEEAPVIWRGPVITGVLTQMYTDTEWGELDYLLIDMPPGTGDI ALTVMQSLPVTNMVVVSTPQDMVSMIVKKVVIMIEKMGIEVLGVVENMSYIKCGSCGEKLNVFSKKSAEEQAEYLNIPLI ADMPINLDLSEEMEKGEVETFIINNEEYAQLYNNFKNLYK
Sequences:
>Translated_280_residues MSNCDSCASKGTCNSEGSCSKETFKYGNAKNIIGVISGKGGVGKSTITGILATKLREEGYKVGVLDGDITGPSMPRFFGI SDKRATIIPTGENEEVKIIPVETKTGMKVMSLNLLTEQEEAPVIWRGPVITGVLTQMYTDTEWGELDYLLIDMPPGTGDI ALTVMQSLPVTNMVVVSTPQDMVSMIVKKVVIMIEKMGIEVLGVVENMSYIKCGSCGEKLNVFSKKSAEEQAEYLNIPLI ADMPINLDLSEEMEKGEVETFIINNEEYAQLYNNFKNLYK >Mature_279_residues SNCDSCASKGTCNSEGSCSKETFKYGNAKNIIGVISGKGGVGKSTITGILATKLREEGYKVGVLDGDITGPSMPRFFGIS DKRATIIPTGENEEVKIIPVETKTGMKVMSLNLLTEQEEAPVIWRGPVITGVLTQMYTDTEWGELDYLLIDMPPGTGDIA LTVMQSLPVTNMVVVSTPQDMVSMIVKKVVIMIEKMGIEVLGVVENMSYIKCGSCGEKLNVFSKKSAEEQAEYLNIPLIA DMPINLDLSEEMEKGEVETFIINNEEYAQLYNNFKNLYK
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI6912540, Length=241, Percent_Identity=36.5145228215768, Blast_Score=165, Evalue=5e-41, Organism=Homo sapiens, GI157384956, Length=245, Percent_Identity=35.1020408163265, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI118572611, Length=300, Percent_Identity=31.6666666666667, Blast_Score=153, Evalue=1e-37, Organism=Escherichia coli, GI87082045, Length=248, Percent_Identity=42.3387096774194, Blast_Score=191, Evalue=5e-50, Organism=Caenorhabditis elegans, GI25143050, Length=290, Percent_Identity=34.4827586206897, Blast_Score=160, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6322188, Length=230, Percent_Identity=40, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6321347, Length=272, Percent_Identity=30.8823529411765, Blast_Score=129, Evalue=6e-31, Organism=Drosophila melanogaster, GI24667611, Length=221, Percent_Identity=41.6289592760181, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI221511043, Length=246, Percent_Identity=33.3333333333333, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI19921440, Length=272, Percent_Identity=33.0882352941176, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR000808 [H]
Pfam domain/function: PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 30628; Mature: 30497
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNCDSCASKGTCNSEGSCSKETFKYGNAKNIIGVISGKGGVGKSTITGILATKLREEGY CCCCHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC KVGVLDGDITGPSMPRFFGISDKRATIIPTGENEEVKIIPVETKTGMKVMSLNLLTEQEE EEEEEECCCCCCCCCCEECCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCC APVIWRGPVITGVLTQMYTDTEWGELDYLLIDMPPGTGDIALTVMQSLPVTNMVVVSTPQ CCEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHEEHHHCCCCEEEEEECCH DMVSMIVKKVVIMIEKMGIEVLGVVENMSYIKCGSCGEKLNVFSKKSAEEQAEYLNIPLI HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHCCCHHHHHHHCCCCEE ADMPINLDLSEEMEKGEVETFIINNEEYAQLYNNFKNLYK ECCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure SNCDSCASKGTCNSEGSCSKETFKYGNAKNIIGVISGKGGVGKSTITGILATKLREEGY CCCHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC KVGVLDGDITGPSMPRFFGISDKRATIIPTGENEEVKIIPVETKTGMKVMSLNLLTEQEE EEEEEECCCCCCCCCCEECCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCC APVIWRGPVITGVLTQMYTDTEWGELDYLLIDMPPGTGDIALTVMQSLPVTNMVVVSTPQ CCEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHEEHHHCCCCEEEEEECCH DMVSMIVKKVVIMIEKMGIEVLGVVENMSYIKCGSCGEKLNVFSKKSAEEQAEYLNIPLI HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHCCCHHHHHHHCCCCEE ADMPINLDLSEEMEKGEVETFIINNEEYAQLYNNFKNLYK ECCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842; 7559358 [H]