| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ywoG [H]
Identifier: 170754797
GI number: 170754797
Start: 1485491
End: 1486690
Strand: Direct
Name: ywoG [H]
Synonym: CLD_3217
Alternate gene names: 170754797
Gene position: 1485491-1486690 (Clockwise)
Preceding gene: 170755137
Following gene: 170755631
Centisome position: 37.53
GC content: 28.58
Gene sequence:
>1200_bases ATGGAGACTAAAGAAAAACTATGGAGCAAATATTTTATATTAGCATTAATTATTACAGTAGGAGTAAATTTAACTTGTAA TTTATTATTATCTACCATATCTATATATGCTAAGAAAATTACTGGGGTAGATAGTTATGCAGGTATAATGACAGGAGCCT TTACATTGGCTGCTTTATTTATAAGAGTATTTGCAGGAAAGTTATTAGACAAACTTGGAAGAAAAAAAATATTGATATTA GGGGTAGTTATTACTGCATTTTCAACTATAGGATATATTTTTAGTAATGGGATAATATTACTTGTAATATTTAGAGTAAT GCAAGGCTTTGGTTTTGGTATTTCATCTACAGCCATAGCTACTATTGTTACTGATGTTACGCCACCGGCAAGAATGCTTG AGGGAATAGGATATTCAGGTGTTGGTATAACAATTACTACAGCCATAGGACCATCTATGGCACTTCACATAGTTGGAAGG GGATACAATGAGTTTAATTTATTATTTATTACAACTTTTGCAGTATCTATAATTACTATACTAGTAGCACTTTTTTTATC CTATGAGAAAAATATTAATATACAATGTGAAAAATTTAAGATTATAAAAAGTGATACAGATTCTAATAGGATTAGTAAAG AAATATTACTACCAGCTTTAATTCTATTTTTAGCAGCAGTTGCAGAAAGTACTATATTATCCTTCACAGCATTATATGGC ATAGAACTAGGATTTGATAATATAGGTTTATTTTTTACAATAAACGCACTAGGAATATTAGCATCAAGATTATTCATAAA TCAAATAGTGGATAAGCTTGGAATGAATACAGTATTGTCTATCGGACTTATAATATTCGCCTTTTCTATATTTGGAATAG CCATGGTAAAAACTATGTATATGTTATTAGTATTGGGATTTTTATGTGGTATTATGATGGGATCATTATTACCTATAATA AATGTAATGATTTTAAATACTGTAAGCCAAGATAAAAAAGGTGTAGCAAATGCTATTTACTATGCATTATTGGATGGTGG TTATGGAATAGGATCAATATTGTGGGGAAGGATTATTATAAACTATGGATATAGAGCTATATATGCCTTAGCAGGTATTG TATTAGTAGTAGCTTTCGTAATATTTGCATTAAATTTATTTTATAGAGGATCTACAATATTAAAAAGGCATTATGAATAA
Upstream 100 bases:
>100_bases AATGAAATTTTATAAATCAATTGTAGCCTAAACTACAATCTATTTTCAAGGTTAAGGGTAAAATTTAATTTGCAGAATTT TTATGGGAGGCAAAAATATT
Downstream 100 bases:
>100_bases AAAGGATGTTATAAAGCTATGGGATGTTTATTTTTCCTATAGCTTTTTTATAAAGTAATGTAAATATATATATAAATCAG GATAAAAAATAAGAATAAAT
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE
Sequences:
>Translated_399_residues METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE >Mature_399_residues METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87082270, Length=389, Percent_Identity=24.4215938303342, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43455; Mature: 43455
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALF CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IRVFAGKLLDKLGRKKILILGVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHH TIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGRGYNEFNLLFITTFAVSIITI HHHHCCCCHHHHHHCCCCCCCCEEEEEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH LVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMY HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVLGFLCGIMMGSLLPIINVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALF CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IRVFAGKLLDKLGRKKILILGVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHH TIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGRGYNEFNLLFITTFAVSIITI HHHHCCCCHHHHHHCCCCCCCCEEEEEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH LVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILLPALILFLAAVAESTILSFTALYG HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMY HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVLGFLCGIMMGSLLPIINVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NYGYRAIYALAGIVLVVAFVIFALNLFYRGSTILKRHYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]