| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754789
Identifier: 170754789
GI number: 170754789
Start: 2010904
End: 2011473
Strand: Reverse
Name: 170754789
Synonym: CLD_2755
Alternate gene names: NA
Gene position: 2011473-2010904 (Counterclockwise)
Preceding gene: 170757695
Following gene: 170755138
Centisome position: 50.82
GC content: 28.6
Gene sequence:
>570_bases TTGGGAAATAAAAAAGATAATAAAAAAGATAATAAGAAGAGTGACTCCAAGGTCAATGTAAAATGGGTCTTAACCATTGT TACATGGTCTGTTATTTTTTCAGGGAGTATATCTCTTGTTTCAGATGTGCTACTAGATAATGTAAACTTATTAGTAGCTT TTATTATATTAATTTTTATTATATTAATTGGTATAATATTTGATATAATAGGAGTTGCAGTAACTGCATCCAATGAAACA CCTTTTCATGCAAAAGCTGCTAATAAAGTACCAGGAGCAAAACTCGCAGTAACTTTTATTAGAAATGCAGAAAAGGTATC AAGTTTTTGTAATGATGTTATAGGAGACGTCTGTGGTATTGTAAGTGGTTCTATAGGAATAATAATAGGAAATAAGATAT TATCCTTAAATTCTACTTTAAATTCTACAGTAGTAGCTACAATTATAGGTGTTACCATAGGAGCTTTAACTATAGGGGGA AAAGCTTTAGGTAAAGGATTTGCTATAACAAATAGTAATGATATATTAGAAAAGGTTACGAGAATAATATATTTTTTTAA AAGAGGATAG
Upstream 100 bases:
>100_bases CAAGGTTTACTCAATACACTACCACCTTTTAAAATTACATATTGAAATGTATAATTTATAAAGTGATTCTTAATACTTAG TTTTCATGGAGGAATTATAA
Downstream 100 bases:
>100_bases ATGAAAATGAAAAACATATTAGATAAATACCAAGATTTTGATAGTATAAAATCCATGTCTATAAATGAGTTAAACCAATT CTCTTACGAGATAAGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MGNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFIILIGIIFDIIGVAVTASNET PFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGIVSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGG KALGKGFAITNSNDILEKVTRIIYFFKRG
Sequences:
>Translated_189_residues MGNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFIILIGIIFDIIGVAVTASNET PFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGIVSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGG KALGKGFAITNSNDILEKVTRIIYFFKRG >Mature_188_residues GNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFIILIGIIFDIIGVAVTASNETP FHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGIVSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGGK ALGKGFAITNSNDILEKVTRIIYFFKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20038; Mature: 19907
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFI CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH ILIGIIFDIIGVAVTASNETPFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGI HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH VSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGGKALGKGFAITNSNDILEKVT HCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCHHHHHHHH RIIYFFKRG HHHHHHCCC >Mature Secondary Structure GNKKDNKKDNKKSDSKVNVKWVLTIVTWSVIFSGSISLVSDVLLDNVNLLVAFIILIFI CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH ILIGIIFDIIGVAVTASNETPFHAKAANKVPGAKLAVTFIRNAEKVSSFCNDVIGDVCGI HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH VSGSIGIIIGNKILSLNSTLNSTVVATIIGVTIGALTIGGKALGKGFAITNSNDILEKVT HCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCHHHHHHHH RIIYFFKRG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA