Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754783

Identifier: 170754783

GI number: 170754783

Start: 2110565

End: 2111380

Strand: Reverse

Name: 170754783

Synonym: CLD_2655

Alternate gene names: NA

Gene position: 2111380-2110565 (Counterclockwise)

Preceding gene: 170757247

Following gene: 170755155

Centisome position: 53.34

GC content: 34.07

Gene sequence:

>816_bases
ATGCCGTTTAAACATGAAAAAATTATTTATGGATTTCCGCAGGATCCATATGATAATAGTATTATTAAAGAATTATGTGA
AGATATTAACTGTGCATTAAATTTTAGTAGAAAACCTGTAGGTATAAAATTATATTTTGACAAAGAAGAATATAGTAAAT
TAGAATGGAAGGAACCTAATGCACCGTTATCTTATTGCTGTGTAGTAGAAAAAGCTACTAGAGGGAAAGCATTTAAAATA
AGACTTGAACATTTAAGTTGTGATGGAGGTACTACTGCCCTAAATTTAGAACCTTCCACAGAAAGAATAGAGTCTGGTGC
AGAATATTTTTCTTACAATTTATATAAAACACCGGCTGCAGCGAGAAGGGTAAGGGAAGGTGTACCCGGATTATATAGGA
CAGGAGCCACTACATATGGAGTGGCAGTGGGACCTTTAGAAGAATTTGAAACTACTCCAGATGTGGTTATTTTTATCGTA
AATCCTTATCAAGCTATGAGAATTCAGCAAGGATATGTATATCATGAAGGTGGAAGATTGGAAATCACAGGCGCTTCAAT
GCAAGCAATTTGTGCAGAAGCAACTGTAGAGCCTTATATAAAAGGTAGACTAAATACCACAGTTCTTTGTCCAAGCACTA
GATTTTTAGCAAAATGGAAGGACGAAGAGATGGCAATAGGAATCCCTTTTGAAAGATTTCAAAGTGTGGTAGAAGGAGTA
ATAGCTACCATAAATACTACAGATATTAAGCGTAGAAAAGATGAGATAAAGCAAAGATTTGCTAAAAAGAATAAGGAAAT
AAATTTAGAGTATTAG

Upstream 100 bases:

>100_bases
ATTTTATATATTATTTCTGTTGCAGTTATGCTTTATTTAAATAATCTTGTTACTTTTTCTGTTAAGTATATATAATAATA
AAACATTGGAGGGATAAAGT

Downstream 100 bases:

>100_bases
TATTGTTAATACTAATATAAACAAGGAAGAGGTTGTTTTAAAATAAAATGTGTTTTGAGACAACTTCTTCCTTATTTATG
TTAAATATAGTTAATTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MPFKHEKIIYGFPQDPYDNSIIKELCEDINCALNFSRKPVGIKLYFDKEEYSKLEWKEPNAPLSYCCVVEKATRGKAFKI
RLEHLSCDGGTTALNLEPSTERIESGAEYFSYNLYKTPAAARRVREGVPGLYRTGATTYGVAVGPLEEFETTPDVVIFIV
NPYQAMRIQQGYVYHEGGRLEITGASMQAICAEATVEPYIKGRLNTTVLCPSTRFLAKWKDEEMAIGIPFERFQSVVEGV
IATINTTDIKRRKDEIKQRFAKKNKEINLEY

Sequences:

>Translated_271_residues
MPFKHEKIIYGFPQDPYDNSIIKELCEDINCALNFSRKPVGIKLYFDKEEYSKLEWKEPNAPLSYCCVVEKATRGKAFKI
RLEHLSCDGGTTALNLEPSTERIESGAEYFSYNLYKTPAAARRVREGVPGLYRTGATTYGVAVGPLEEFETTPDVVIFIV
NPYQAMRIQQGYVYHEGGRLEITGASMQAICAEATVEPYIKGRLNTTVLCPSTRFLAKWKDEEMAIGIPFERFQSVVEGV
IATINTTDIKRRKDEIKQRFAKKNKEINLEY
>Mature_270_residues
PFKHEKIIYGFPQDPYDNSIIKELCEDINCALNFSRKPVGIKLYFDKEEYSKLEWKEPNAPLSYCCVVEKATRGKAFKIR
LEHLSCDGGTTALNLEPSTERIESGAEYFSYNLYKTPAAARRVREGVPGLYRTGATTYGVAVGPLEEFETTPDVVIFIVN
PYQAMRIQQGYVYHEGGRLEITGASMQAICAEATVEPYIKGRLNTTVLCPSTRFLAKWKDEEMAIGIPFERFQSVVEGVI
ATINTTDIKRRKDEIKQRFAKKNKEINLEY

Specific function: Unknown

COG id: COG2043

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003748 [H]

Pfam domain/function: PF02596 DUF169 [H]

EC number: NA

Molecular weight: Translated: 30826; Mature: 30694

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFKHEKIIYGFPQDPYDNSIIKELCEDINCALNFSRKPVGIKLYFDKEEYSKLEWKEPN
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHEEEECCCCCEEEEEEECHHHHCCCCCCCCC
APLSYCCVVEKATRGKAFKIRLEHLSCDGGTTALNLEPSTERIESGAEYFSYNLYKTPAA
CCEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEECCCHHHHHCCHHHEEEEEEECCHH
ARRVREGVPGLYRTGATTYGVAVGPLEEFETTPDVVIFIVNPYQAMRIQQGYVYHEGGRL
HHHHHHCCCCHHHCCCCEEEEEECCHHHHCCCCCEEEEEECCHHHEEEECCEEEECCCEE
EITGASMQAICAEATVEPYIKGRLNTTVLCPSTRFLAKWKDEEMAIGIPFERFQSVVEGV
EEECCHHHHHHHHCCCCHHHCCCCCEEEECCCCHHHEECCCCCEEEECCHHHHHHHHHHH
IATINTTDIKRRKDEIKQRFAKKNKEINLEY
HHHCCCHHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
PFKHEKIIYGFPQDPYDNSIIKELCEDINCALNFSRKPVGIKLYFDKEEYSKLEWKEPN
CCCCCEEEEECCCCCCCCHHHHHHHHHHHEEEECCCCCEEEEEEECHHHHCCCCCCCCC
APLSYCCVVEKATRGKAFKIRLEHLSCDGGTTALNLEPSTERIESGAEYFSYNLYKTPAA
CCEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEECCCHHHHHCCHHHEEEEEEECCHH
ARRVREGVPGLYRTGATTYGVAVGPLEEFETTPDVVIFIVNPYQAMRIQQGYVYHEGGRL
HHHHHHCCCCHHHCCCCEEEEEECCHHHHCCCCCEEEEEECCHHHEEEECCEEEECCCEE
EITGASMQAICAEATVEPYIKGRLNTTVLCPSTRFLAKWKDEEMAIGIPFERFQSVVEGV
EEECCHHHHHHHHCCCCHHHCCCCCEEEECCCCHHHEECCCCCEEEECCHHHHHHHHHHH
IATINTTDIKRRKDEIKQRFAKKNKEINLEY
HHHCCCHHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]