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The map label for this gene is motB

Identifier: 170754769

GI number: 170754769

Start: 2421396

End: 2422160

Strand: Reverse

Name: motB

Synonym: CLD_2349

Alternate gene names: 170754769

Gene position: 2422160-2421396 (Counterclockwise)

Preceding gene: 170754260

Following gene: 170755782

Centisome position: 61.19

GC content: 33.07

Gene sequence:

>765_bases
ATGAAGAAAAAAGAATCTCATGAAGATCATATTGATGAAACATGGCTTATTCCATATTCAGATATGTTAACCCTTCTTTT
GGCACTATTTATTGTTATGTTCGCTATGAGTAAGGTAGATACTGCAAAATTGCAGAAAGCTAGCCAGGAGTTTAATATTA
TTTTTAAAGCAGGAAGTAATGTGTTGCAAGAAGGTGGAGGTGGGGGTGCTTCAGTAGGTAAAGCAGGTGTTTCAATTGTT
CCGAGCGATAGTATGACTGAGGATATCAAGATGAAAGAAATTAAATCAAAGTTGGAAAAAGAAATTGAAAAAAGTGGATA
TTCTGACAAGGTTAAAGTTGGAGTTGACGCTGATGGTCTAGAGATTGATATACAAGATGTTGTGCTTTTTAATTCTGGCG
ATGCAGAGGTATTAAAACAGTCATCAGCACTATTAACACAAATTTCTAAAATGCTTAAAGGTTTAGATAATAATATTAAA
GTTACAGGACACACGGATAATCAACCCATAAGTAATTCAAAATTTCGTTCTAATTGGGATTTAAGTGCAATACGTGCTAT
AAATGTAATGAACTTTCTTAGTAACATAGGGGGAATTTCTGCAAATAAGTTATCAATCCAAGCTTATGGTGAGTATATGC
CTAAATTTGATAATGCTACAGAAGCTGGTAGAGCAAAAAATAGAAGAGTAGAAATTTCTATAGTTCGTAAGTATCCATCA
ACGTCAGTTACAAAAGAAACTAATAAGGATAACAGCAAAAAGTAA

Upstream 100 bases:

>100_bases
CTCAGAAAATACAAGAAAAACTTATAGGCATGTTAGAACCAAATGAAAGAATAAAAATAGAGGCACACAATATTAAAGGA
TAACTTAAAGGAGAATAAAA

Downstream 100 bases:

>100_bases
TAATGCTGTTAGTTAGTTTTAAGCACTAAGGAAACTTAGGAGGCTTTTTAATTATATAATAATATATTTTGGATTATTAA
TCACCTTTCATGGTAATTTT

Product: chemotaxis MotB protein

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSNVLQEGGGGGASVGKAGVSIV
PSDSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIK
VTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGISANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRKYPS
TSVTKETNKDNSKK

Sequences:

>Translated_254_residues
MKKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSNVLQEGGGGGASVGKAGVSIV
PSDSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIK
VTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGISANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRKYPS
TSVTKETNKDNSKK
>Mature_254_residues
MKKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSNVLQEGGGGGASVGKAGVSIV
PSDSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIK
VTGHTDNQPISNSKFRSNWDLSAIRAINVMNFLSNIGGISANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRKYPS
TSVTKETNKDNSKK

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=255, Percent_Identity=25.8823529411765, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 27899; Mature: 27899

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSN
CCCCCCCHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCH
VLQEGGGGGASVGKAGVSIVPSDSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDADGL
HHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
EIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFRSNWD
EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
LSAIRAINVMNFLSNIGGISANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRKYPS
HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCHHHCCCCCCEEEEEEEEECCC
TSVTKETNKDNSKK
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKESHEDHIDETWLIPYSDMLTLLLALFIVMFAMSKVDTAKLQKASQEFNIIFKAGSN
CCCCCCCHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCH
VLQEGGGGGASVGKAGVSIVPSDSMTEDIKMKEIKSKLEKEIEKSGYSDKVKVGVDADGL
HHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
EIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFRSNWD
EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
LSAIRAINVMNFLSNIGGISANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISIVRKYPS
HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCHHHCCCCCCEEEEEEEEECCC
TSVTKETNKDNSKK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]