| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754726
Identifier: 170754726
GI number: 170754726
Start: 3275758
End: 3277266
Strand: Reverse
Name: 170754726
Synonym: CLD_1518
Alternate gene names: NA
Gene position: 3277266-3275758 (Counterclockwise)
Preceding gene: 170754688
Following gene: 170755616
Centisome position: 82.8
GC content: 29.56
Gene sequence:
>1509_bases ATGGCTACAGATAATTTTTATTGTGTAAATGGAAACACAAGCGTAAAAGATATAATTAAAAACTTAACAAAAGAAATAAC ACAAAATGCTGGAATTTATAAATGGGACTTAGTTTCCCCTAGTGCAATAGATAAAGTTAGAAATTTTAGCTTGATAAAAG CTACTACATCTTATGGAAAAGAATTTTACATTAGATTTGAAAGAACAGCAGCATTAACACCAACAAGTGAGGAACAAAAA CTATTAGATAAAGAAAGGTACAGTAAACCATTTACTGAACAGGAAATAACACTTCTTAATAGATATGTTGAAGCTATGCC TTTAACAAGCTTTGAGAAAAATTTAATAAAGAAAAATTTAGATTCCTTAACTACAGATGAACAAAATGATTTACAACAAT TACGAGTAAGAAAGAATATAACGAATGATAGAGAACTATTTTTGCTTAGAAAATATTATAATGGTGAAAGTCTTTCTACT GCTGAACAAAATGAATTAGACACTTATAGAAATGTACACAATTTAACTGCTCAAGAGTTGATAGATTGGAGTAAACTCAA AACAAATACAAAACTTTATGCTGATTCTATAATAAATATACTTTATAAACAATATGCTGGATCGGTATTATCTCAAAGTG AACAAAATTCTTTGGCGAGTTATAGAAATAGCATGGAACTGACACAAAGTGAAAAAGAAAAATTAGCAATGCTAAAAGGT AAAATGGATAATAGAAATCATATGTATATAACTATAGGTAAAGAGATTCATGACACTAAAAAAATTGTAGAGGTAGATGG AGAACAAACAGAAGTAGATATTAAAGATTTAGTTGAGGAGAGTTGTTCTGTACCATCAAGATTTGCATGGTATAAGAAGC TTGCACCAGAAATAGGAGAGTGGCTACCTATAGAATATTATATAAATATCACAAAAGATGCAGTGAATATAATGTTAGAA GGGGATAAAAGTGCAGATAACTACCCTTATAATAACAATTTAACAAGTTATGCGTATATTGGAGCTATTAAGCCAATGGA AGATTCAGCATCCACAGATGATAAATATAACTTTGGAGTAGTTACATCTTCAGATATACCACCATTTTTTACAAAAAAGT TTGGTGAAAGAACTGCTACAGGAATTACAGATGTGTGTATGGTAGGTAATAAGATAGGTATGCCAATGCAACCTCATTAT CCTGAATTTAGTACAACAACAACTTTTGTAGATAAATGTAATACGGAAGGAAGTAGATGGAATCATAAAAAACATAAATT TGATGAAATTATTTTATTTCATCCTGTTGATGGTGAAAGAGGCAAGCTGATTAATGTATTGGCTGGGGATGGTAATGGAA TATGGAATAAGGATACGTTAGTTTATAAAAAAGGTACAGAAGAAGAAGAAAATTATAAGAAGTTTAAAATTACAGCACCA TATAGTCTAATGAACAATAGTCCTAATCCATTGTATTGTATTGCAATCAGATGGTATAAATCAGAATAG
Upstream 100 bases:
>100_bases CAGATGATAGTTATATAAAGGGTGTATTTACAATAGATTTAAATACTTTAAAAATAACAAAATTAAATAAAAATAAGAAG AAGTATTAGGAGGTAGAAAA
Downstream 100 bases:
>100_bases AGGTGGTATAAATGCCCCTACATAAAATTCCCCTATGTAGTTTTAAGTATGTAGGGGATAATACTCTTTCTAGTGGAATT TTTATATATGATACTAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGKEFYIRFERTAALTPTSEEQK LLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNLDSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLST AEQNELDTYRNVHNLTAQELIDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGEWLPIEYYINITKDAVNIMLE GDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGVVTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHY PEFSTTTTFVDKCNTEGSRWNHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP YSLMNNSPNPLYCIAIRWYKSE
Sequences:
>Translated_502_residues MATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGKEFYIRFERTAALTPTSEEQK LLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNLDSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLST AEQNELDTYRNVHNLTAQELIDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGEWLPIEYYINITKDAVNIMLE GDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGVVTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHY PEFSTTTTFVDKCNTEGSRWNHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP YSLMNNSPNPLYCIAIRWYKSE >Mature_501_residues ATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGKEFYIRFERTAALTPTSEEQKL LDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNLDSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLSTA EQNELDTYRNVHNLTAQELIDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKGK MDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGEWLPIEYYINITKDAVNIMLEG DKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGVVTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHYP EFSTTTTFVDKCNTEGSRWNHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAPY SLMNNSPNPLYCIAIRWYKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57793; Mature: 57662
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGK CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCEEEEEEHHCCC EFYIRFERTAALTPTSEEQKLLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNL EEEEEEECEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH DSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLSTAEQNELDTYRNVHNLTAQEL HHCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH IDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGE CCCCCCEEEEEECCHHHCCHHHEEECCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHC WLPIEYYINITKDAVNIMLEGDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGV CCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEE VTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHYPEFSTTTTFVDKCNTEGSRW EECCCCCHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC NHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP CCCHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECC YSLMNNSPNPLYCIAIRWYKSE HHHHCCCCCCEEEEEEEEECCC >Mature Secondary Structure ATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGK CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCEEEEEEHHCCC EFYIRFERTAALTPTSEEQKLLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNL EEEEEEECEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH DSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLSTAEQNELDTYRNVHNLTAQEL HHCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH IDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGE CCCCCCEEEEEECCHHHCCHHHEEECCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHC WLPIEYYINITKDAVNIMLEGDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGV CCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEE VTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHYPEFSTTTTFVDKCNTEGSRW EECCCCCHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC NHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP CCCHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECC YSLMNNSPNPLYCIAIRWYKSE HHHHCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA