| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754715
Identifier: 170754715
GI number: 170754715
Start: 2325483
End: 2326076
Strand: Reverse
Name: 170754715
Synonym: CLD_2445
Alternate gene names: NA
Gene position: 2326076-2325483 (Counterclockwise)
Preceding gene: 170755692
Following gene: 170756994
Centisome position: 58.77
GC content: 33.67
Gene sequence:
>594_bases ATGAAATTTAAAATGAAACCAGTAGCTATATTATTTATGGCACTACTACTATCTATTTCTGTACCATTGACTGCTTTTGC TAGTACTTCTACAAAAAATTCACTTGTAAATGTTGTTGTTTCTGATAGTGATGCAAAAACTATAATTGCTCAAGTACCAA AAGAACATGTTGCTGAATATAAAGAAAAATTAAAGAATCCTGATTTTAAACAAGAGCAAATTAACATGATGAATGGCAGT ACACGTACTCTTCCAGAAGGAAAAATTATTACACAAAAATATTTAGACAGATCTGATGTAAAAAGAGCATATGAGGCTGT TCAACCTGGTGCATTTGAATCTATTATTATTGATCTTGGGGCAGGAGCTGCTCTTGGACAGATAATGAAAGCTTTAAATG CCTCTAACGCGTGGACTCTTACAGCTACAGTAGTCGCTTGGGCAGTTGAGTATATAAGAATTAAGCCGCAGGATTGGTGG ACACAATCATATATAATGCTTTTAGAAAATCGTATTAGTTGTGTAAGAATGTCACATATTGAAAACCTAAAGCCAACGTA TCCTGCAGCTTGGTTAATTTTAGAAAGGTTATAG
Upstream 100 bases:
>100_bases TAATTGTTAATAAATGGATTAGACATAAGATTATACAAAAATTTACATTTATTAGTGGTAAAATAATCATGTAGTATAAT CTAATTAAGGAGCGATTTTT
Downstream 100 bases:
>100_bases ATTTATTAAACATATGTAATCTAACTAATTTATAAGGAAAATTAAAGAAAAAGATTATATCTTATATAAAGAAGATATAA TCTTTTTTATCTATAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKFKMKPVAILFMALLLSISVPLTAFASTSTKNSLVNVVVSDSDAKTIIAQVPKEHVAEYKEKLKNPDFKQEQINMMNGS TRTLPEGKIITQKYLDRSDVKRAYEAVQPGAFESIIIDLGAGAALGQIMKALNASNAWTLTATVVAWAVEYIRIKPQDWW TQSYIMLLENRISCVRMSHIENLKPTYPAAWLILERL
Sequences:
>Translated_197_residues MKFKMKPVAILFMALLLSISVPLTAFASTSTKNSLVNVVVSDSDAKTIIAQVPKEHVAEYKEKLKNPDFKQEQINMMNGS TRTLPEGKIITQKYLDRSDVKRAYEAVQPGAFESIIIDLGAGAALGQIMKALNASNAWTLTATVVAWAVEYIRIKPQDWW TQSYIMLLENRISCVRMSHIENLKPTYPAAWLILERL >Mature_197_residues MKFKMKPVAILFMALLLSISVPLTAFASTSTKNSLVNVVVSDSDAKTIIAQVPKEHVAEYKEKLKNPDFKQEQINMMNGS TRTLPEGKIITQKYLDRSDVKRAYEAVQPGAFESIIIDLGAGAALGQIMKALNASNAWTLTATVVAWAVEYIRIKPQDWW TQSYIMLLENRISCVRMSHIENLKPTYPAAWLILERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22116; Mature: 22116
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKMKPVAILFMALLLSISVPLTAFASTSTKNSLVNVVVSDSDAKTIIAQVPKEHVAEY CCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHH KEKLKNPDFKQEQINMMNGSTRTLPEGKIITQKYLDRSDVKRAYEAVQPGAFESIIIDLG HHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHEEECC AGAALGQIMKALNASNAWTLTATVVAWAVEYIRIKPQDWWTQSYIMLLENRISCVRMSHI CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH ENLKPTYPAAWLILERL HCCCCCCCHHHHHHHCC >Mature Secondary Structure MKFKMKPVAILFMALLLSISVPLTAFASTSTKNSLVNVVVSDSDAKTIIAQVPKEHVAEY CCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHH KEKLKNPDFKQEQINMMNGSTRTLPEGKIITQKYLDRSDVKRAYEAVQPGAFESIIIDLG HHHHCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHEEECC AGAALGQIMKALNASNAWTLTATVVAWAVEYIRIKPQDWWTQSYIMLLENRISCVRMSHI CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH ENLKPTYPAAWLILERL HCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA