Click here to switch to the map view.

The map label for this gene is 170754712

Identifier: 170754712

GI number: 170754712

Start: 3437904

End: 3440501

Strand: Reverse

Name: 170754712

Synonym: CLD_1363

Alternate gene names: NA

Gene position: 3440501-3437904 (Counterclockwise)

Preceding gene: 170755640

Following gene: 170755727

Centisome position: 86.92

GC content: 26.02

Gene sequence:

>2598_bases
ATGAAAGGTTACGTGGAAATATCTAGTAAATACTTTAGGCAGAATAAAAGAAGAAGCATTGTTAATATAATTGCAATAAT
ATTAGCTACTATGTTTATAAGTGGTACAGGGCACATGATGTATTCTTCTCAGCAAAATATTATTAATATGATAAGAGAAG
ATGGAGATTATCATTTTAAATTTGAATTGCCCCAAAAAGAAAAATTTTCAAAGATTAAGGGACACTCGGCGGTGGAGAAG
ACAAGCTTCTGTAGAAAGCTTGGAAGTGTGCAATTAGGAGAAAAAACATTATCAATTAATGAAATAAATAATGAAGGATT
TAGTTTATTAGGGGTAAGACTTAAAGAGGGAAGATTCCCTAAAAAATCAAATGAAATAATACTAAATTTAGATTTAAAAG
AAAGAGAACATAAAAAGATTGGAGACAAAATAACTGTTAAATTAGATAATAATAGAAATATAGATTATACCATTGTAGGT
TTTTCACAATTTACTAATAAAGCTTTTTTGAAGACATTTGATGCATACGCCATCAATGATAATGGAGTGATTGATAATGT
AGAGGTATATGTGAAATTAGAGGAAGTAAGAAATTTAAATAATAAAATAAATAATTTAGCTAAAGAATTTAGTATAGATG
CTGATAAAATTGAAAAGAATGAAGCACTCTTAACTGCGATGGGAGAGGGTAGAACCAAAAGTGATATTATAGATTATATT
ACTTTTTTTATGGTAGCTATTATTGTAATGATTGCAACATTAATATTTATATATAATTCATTTAATATATCTACAGTAGA
GAGAATGAAGGAATATGGATTAATAAAGGCTATAGGTGGAACTAATAAGCAGATAAAAAAAATTATTTTAAAAGAAGTTT
TTATAATTGGGGCAATATCTTTGCCTATAGGACTTTTAGCAGGAATGGCAGCAGGTTCAGTGTTATTTAGAGCATTTAAT
AGTTTGATTTTAAGTAAATCAATTACTATAAAAACCTATTATTCTCCATACAGTATTTTGGGGACAATAATAATTACGAT
TATCATATTATATTTATCAGTAATTTCTATACTGGGAAAAGTAAAAAAAGTATCACCACTAGATTGTTTTACTAATAGAA
GTTGTGATGTGAAAAAAGCAAATACAAGAAATAAAAAAATAAGTAATAAGTTTTTGAGCATTGAAGAAGTTATTGCAAAT
AGAAATATAAGAACCAATAAGGGAAGATTTAGAACAACAGTAATTTCAATTGTAATTTCAATAACTCTTTTTATTACTTT
TAGTAGTTTAGTTTCCAACATAGAACAGTTGCCTTATGAAGCTTTGCCAATAGATAATTATATGTGTGGGCATAATCATT
ATTTCATTAATATATATAACGATGAAACCAATAAAGAAATGATAAAAAACAATAGTGAACAAATAAAGAGAGTTGTAGAA
AACGTTAAAAAAATACATGGTGTAAAAGATGTATATAGAATATATCAGGGAATAAAGTCTTATACTTTTATACCTGAAAA
AAAAGCATTAGTAAAAGGTAAATCAATAAGTATTGAAGGTAACAAATATACTAATATAAAATCTGAAATAGTACCAATTG
ATTTAGAAACTATTGATCAGCTTTCACCATATCTTTTGAAAAAATTTAATGATAAGGAAAAGATGAAAAAAGAAAAAGGT
GTTTATATTACTCAAATAAGTTATGAAAATGATATGGAAAATTTAGGAGAGAACAAATATAAGAAGAAAAATATTGCAAC
TTTGAAAGTAGGAGATGAAATACTAATTGATACATCAAATTTAATGTATAATAATAAATTTGAAAGTAATAGTAATACAA
TAAAAGGAGCTATGAAAGTAAAGGTTTTGGGTGTAGTTAGGGTAATTCTATTTGACAAGGAGAATTTTTATAATATGTCT
CCAATAATATATATGCCTAAGGAAGTTTATAATGCGCTAATTGAAAAGAAATATGCTAATGCATCAAAAGATAATAAAAG
TAATATTAGAAAAAAACGAGAATTAGATAGATTGAAGCCTCCGGAACTTAAAGGCATGATTGTAAGTTATAAGGATAATG
TAAGTAATAAGGAAAGAGGAGATATTGGAGAAGAATTATTGGAGCAATGGAGAGCGTGTAGTGATGATGGTAAAGTTAAT
GGTACAAGTATTTTTAGTGAAAAAAATGATAAATATATTAAATTTAGTAAGCTCTTTTATTTTAGTGTTATAGCCTTTAT
ATCTATTATAAGTATGGCAAATGTATTTAATATAGTAAATACTAATGTAATCTTAAGAAGTAAGGAACTAGCACTTCTAA
GCGTTGTTGGTGCTTCTAGAAAAAGTATAAAGAAAATAATGTATCTGGAAGGGATGTTATATTCGATTATAGGAATAATA
TATGGAAATGTTATCGGATGGATAAATTCTATACTGATTAATATGATGTTTAGAACAGGACATGATATAGCATATGTGTA
TCCTTTTAAGGAAACTTTGATAAGTATAGTGTTTTTTATGGTGGTTGGAATATTAGCAATATATTTTCCATTAAGGAAAA
TTAAAAAGGAAAATCTATTGCAATATAAAGAATATTGA

Upstream 100 bases:

>100_bases
AGGGGGAAGTTACTTGGATAAGAATGTTTAAAATAAAAAAATTAGCATAAAAATATTTCAAAATTTTCTCAATGTCTAGG
AAGGTAGGGGGGGAGATAAT

Downstream 100 bases:

>100_bases
TTAGGAGGAAGTCTAATGTTAAGTATAAATAAGCTTTATAGAACATATGGAAGTGGAGAAACAAAGGTAGATGCTATAAA
AAACATAAATTTAACCATTA

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Permease; Efflux ABC Transporter Permease Protein; ABC Transporter-Associated Permease; ATP Transporter Permease; ABC Transport System Permease Protein; ABC Transporter Integral Membrane Protein

Number of amino acids: Translated: 865; Mature: 865

Protein sequence:

>865_residues
MKGYVEISSKYFRQNKRRSIVNIIAIILATMFISGTGHMMYSSQQNIINMIREDGDYHFKFELPQKEKFSKIKGHSAVEK
TSFCRKLGSVQLGEKTLSINEINNEGFSLLGVRLKEGRFPKKSNEIILNLDLKEREHKKIGDKITVKLDNNRNIDYTIVG
FSQFTNKAFLKTFDAYAINDNGVIDNVEVYVKLEEVRNLNNKINNLAKEFSIDADKIEKNEALLTAMGEGRTKSDIIDYI
TFFMVAIIVMIATLIFIYNSFNISTVERMKEYGLIKAIGGTNKQIKKIILKEVFIIGAISLPIGLLAGMAAGSVLFRAFN
SLILSKSITIKTYYSPYSILGTIIITIIILYLSVISILGKVKKVSPLDCFTNRSCDVKKANTRNKKISNKFLSIEEVIAN
RNIRTNKGRFRTTVISIVISITLFITFSSLVSNIEQLPYEALPIDNYMCGHNHYFINIYNDETNKEMIKNNSEQIKRVVE
NVKKIHGVKDVYRIYQGIKSYTFIPEKKALVKGKSISIEGNKYTNIKSEIVPIDLETIDQLSPYLLKKFNDKEKMKKEKG
VYITQISYENDMENLGENKYKKKNIATLKVGDEILIDTSNLMYNNKFESNSNTIKGAMKVKVLGVVRVILFDKENFYNMS
PIIYMPKEVYNALIEKKYANASKDNKSNIRKKRELDRLKPPELKGMIVSYKDNVSNKERGDIGEELLEQWRACSDDGKVN
GTSIFSEKNDKYIKFSKLFYFSVIAFISIISMANVFNIVNTNVILRSKELALLSVVGASRKSIKKIMYLEGMLYSIIGII
YGNVIGWINSILINMMFRTGHDIAYVYPFKETLISIVFFMVVGILAIYFPLRKIKKENLLQYKEY

Sequences:

>Translated_865_residues
MKGYVEISSKYFRQNKRRSIVNIIAIILATMFISGTGHMMYSSQQNIINMIREDGDYHFKFELPQKEKFSKIKGHSAVEK
TSFCRKLGSVQLGEKTLSINEINNEGFSLLGVRLKEGRFPKKSNEIILNLDLKEREHKKIGDKITVKLDNNRNIDYTIVG
FSQFTNKAFLKTFDAYAINDNGVIDNVEVYVKLEEVRNLNNKINNLAKEFSIDADKIEKNEALLTAMGEGRTKSDIIDYI
TFFMVAIIVMIATLIFIYNSFNISTVERMKEYGLIKAIGGTNKQIKKIILKEVFIIGAISLPIGLLAGMAAGSVLFRAFN
SLILSKSITIKTYYSPYSILGTIIITIIILYLSVISILGKVKKVSPLDCFTNRSCDVKKANTRNKKISNKFLSIEEVIAN
RNIRTNKGRFRTTVISIVISITLFITFSSLVSNIEQLPYEALPIDNYMCGHNHYFINIYNDETNKEMIKNNSEQIKRVVE
NVKKIHGVKDVYRIYQGIKSYTFIPEKKALVKGKSISIEGNKYTNIKSEIVPIDLETIDQLSPYLLKKFNDKEKMKKEKG
VYITQISYENDMENLGENKYKKKNIATLKVGDEILIDTSNLMYNNKFESNSNTIKGAMKVKVLGVVRVILFDKENFYNMS
PIIYMPKEVYNALIEKKYANASKDNKSNIRKKRELDRLKPPELKGMIVSYKDNVSNKERGDIGEELLEQWRACSDDGKVN
GTSIFSEKNDKYIKFSKLFYFSVIAFISIISMANVFNIVNTNVILRSKELALLSVVGASRKSIKKIMYLEGMLYSIIGII
YGNVIGWINSILINMMFRTGHDIAYVYPFKETLISIVFFMVVGILAIYFPLRKIKKENLLQYKEY
>Mature_865_residues
MKGYVEISSKYFRQNKRRSIVNIIAIILATMFISGTGHMMYSSQQNIINMIREDGDYHFKFELPQKEKFSKIKGHSAVEK
TSFCRKLGSVQLGEKTLSINEINNEGFSLLGVRLKEGRFPKKSNEIILNLDLKEREHKKIGDKITVKLDNNRNIDYTIVG
FSQFTNKAFLKTFDAYAINDNGVIDNVEVYVKLEEVRNLNNKINNLAKEFSIDADKIEKNEALLTAMGEGRTKSDIIDYI
TFFMVAIIVMIATLIFIYNSFNISTVERMKEYGLIKAIGGTNKQIKKIILKEVFIIGAISLPIGLLAGMAAGSVLFRAFN
SLILSKSITIKTYYSPYSILGTIIITIIILYLSVISILGKVKKVSPLDCFTNRSCDVKKANTRNKKISNKFLSIEEVIAN
RNIRTNKGRFRTTVISIVISITLFITFSSLVSNIEQLPYEALPIDNYMCGHNHYFINIYNDETNKEMIKNNSEQIKRVVE
NVKKIHGVKDVYRIYQGIKSYTFIPEKKALVKGKSISIEGNKYTNIKSEIVPIDLETIDQLSPYLLKKFNDKEKMKKEKG
VYITQISYENDMENLGENKYKKKNIATLKVGDEILIDTSNLMYNNKFESNSNTIKGAMKVKVLGVVRVILFDKENFYNMS
PIIYMPKEVYNALIEKKYANASKDNKSNIRKKRELDRLKPPELKGMIVSYKDNVSNKERGDIGEELLEQWRACSDDGKVN
GTSIFSEKNDKYIKFSKLFYFSVIAFISIISMANVFNIVNTNVILRSKELALLSVVGASRKSIKKIMYLEGMLYSIIGII
YGNVIGWINSILINMMFRTGHDIAYVYPFKETLISIVFFMVVGILAIYFPLRKIKKENLLQYKEY

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99002; Mature: 99002

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGYVEISSKYFRQNKRRSIVNIIAIILATMFISGTGHMMYSSQQNIINMIREDGDYHFK
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCEEEE
FELPQKEKFSKIKGHSAVEKTSFCRKLGSVQLGEKTLSINEINNEGFSLLGVRLKEGRFP
EECCCHHHHHHHCCCCHHHHHHHHHHHCCCEECCEEEEEEECCCCCCEEEEEEEECCCCC
KKSNEIILNLDLKEREHKKIGDKITVKLDNNRNIDYTIVGFSQFTNKAFLKTFDAYAIND
CCCCCEEEEECCCHHHHHHCCCEEEEEECCCCCEEEEEEEHHHHCCHHHHHHHCCEEECC
NGVIDNVEVYVKLEEVRNLNNKINNLAKEFSIDADKIEKNEALLTAMGEGRTKSDIIDYI
CCCEECEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCHHHHHHHH
TFFMVAIIVMIATLIFIYNSFNISTVERMKEYGLIKAIGGTNKQIKKIILKEVFIIGAIS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHH
LPIGLLAGMAAGSVLFRAFNSLILSKSITIKTYYSPYSILGTIIITIIILYLSVISILGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
VKKVSPLDCFTNRSCDVKKANTRNKKISNKFLSIEEVIANRNIRTNKGRFRTTVISIVIS
HCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ITLFITFSSLVSNIEQLPYEALPIDNYMCGHNHYFINIYNDETNKEMIKNNSEQIKRVVE
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCHHHHHCCHHHHHHHHH
NVKKIHGVKDVYRIYQGIKSYTFIPEKKALVKGKSISIEGNKYTNIKSEIVPIDLETIDQ
HHHHHHCHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEECHHHHHH
LSPYLLKKFNDKEKMKKEKGVYITQISYENDMENLGENKYKKKNIATLKVGDEILIDTSN
CCHHHHHHCCCHHHHHHHCCEEEEEEECCCCHHHCCCCHHHHCCEEEEEECCEEEEECCC
LMYNNKFESNSNTIKGAMKVKVLGVVRVILFDKENFYNMSPIIYMPKEVYNALIEKKYAN
CEECCCCCCCCCEEHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCC
ASKDNKSNIRKKRELDRLKPPELKGMIVSYKDNVSNKERGDIGEELLEQWRACSDDGKVN
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
GTSIFSEKNDKYIKFSKLFYFSVIAFISIISMANVFNIVNTNVILRSKELALLSVVGASR
CCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCH
KSIKKIMYLEGMLYSIIGIIYGNVIGWINSILINMMFRTGHDIAYVYPFKETLISIVFFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH
VVGILAIYFPLRKIKKENLLQYKEY
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKGYVEISSKYFRQNKRRSIVNIIAIILATMFISGTGHMMYSSQQNIINMIREDGDYHFK
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCEEEE
FELPQKEKFSKIKGHSAVEKTSFCRKLGSVQLGEKTLSINEINNEGFSLLGVRLKEGRFP
EECCCHHHHHHHCCCCHHHHHHHHHHHCCCEECCEEEEEEECCCCCCEEEEEEEECCCCC
KKSNEIILNLDLKEREHKKIGDKITVKLDNNRNIDYTIVGFSQFTNKAFLKTFDAYAIND
CCCCCEEEEECCCHHHHHHCCCEEEEEECCCCCEEEEEEEHHHHCCHHHHHHHCCEEECC
NGVIDNVEVYVKLEEVRNLNNKINNLAKEFSIDADKIEKNEALLTAMGEGRTKSDIIDYI
CCCEECEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCHHHHHHHH
TFFMVAIIVMIATLIFIYNSFNISTVERMKEYGLIKAIGGTNKQIKKIILKEVFIIGAIS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHH
LPIGLLAGMAAGSVLFRAFNSLILSKSITIKTYYSPYSILGTIIITIIILYLSVISILGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
VKKVSPLDCFTNRSCDVKKANTRNKKISNKFLSIEEVIANRNIRTNKGRFRTTVISIVIS
HCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ITLFITFSSLVSNIEQLPYEALPIDNYMCGHNHYFINIYNDETNKEMIKNNSEQIKRVVE
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCHHHHHCCHHHHHHHHH
NVKKIHGVKDVYRIYQGIKSYTFIPEKKALVKGKSISIEGNKYTNIKSEIVPIDLETIDQ
HHHHHHCHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEECHHHHHH
LSPYLLKKFNDKEKMKKEKGVYITQISYENDMENLGENKYKKKNIATLKVGDEILIDTSN
CCHHHHHHCCCHHHHHHHCCEEEEEEECCCCHHHCCCCHHHHCCEEEEEECCEEEEECCC
LMYNNKFESNSNTIKGAMKVKVLGVVRVILFDKENFYNMSPIIYMPKEVYNALIEKKYAN
CEECCCCCCCCCEEHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCC
ASKDNKSNIRKKRELDRLKPPELKGMIVSYKDNVSNKERGDIGEELLEQWRACSDDGKVN
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
GTSIFSEKNDKYIKFSKLFYFSVIAFISIISMANVFNIVNTNVILRSKELALLSVVGASR
CCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCH
KSIKKIMYLEGMLYSIIGIIYGNVIGWINSILINMMFRTGHDIAYVYPFKETLISIVFFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH
VVGILAIYFPLRKIKKENLLQYKEY
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA