Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754691

Identifier: 170754691

GI number: 170754691

Start: 642976

End: 643815

Strand: Direct

Name: 170754691

Synonym: CLD_0227

Alternate gene names: NA

Gene position: 642976-643815 (Clockwise)

Preceding gene: 170756852

Following gene: 170756358

Centisome position: 16.24

GC content: 25.48

Gene sequence:

>840_bases
ATGAGTATTAAGATAACTACTCTGATAGAAGATTCTAAAAATGAAGAAAGTGAATTGATAGAAGAGCATGGGCTTTCTAT
GTTCATAAATACTCCTAGGTGTAATATAATATTTGATACTGGTGCTTCGGGAAACTTTATAAAAAATGCTGATAAACTAA
ATATTGATTTACATGAAACTAATTATATGATACTAAGCCATGCTCATTATGATCATTGTGGAGGAGTAAGAAGTTTTATA
GAAAATATAAAATGTTATCCAGAATTATATGTAAGTAAAAATTTTTTTGGAAATAGCAATAAATTTAAAATAGGGAAAGA
TAGAGAAAATAAATATTTAGGTATAGATTTTGATGAGAAGTATTTAATAGATAATGGTATACCCATAAATTATGTGGAGG
AAGATATTTTAGAAATAGAACCTAATATATTTATAGTTACAAATTTTAAAGAGGATAATAGTTTTGAAGAGTTTACATCT
AATATGGTAATAAAAAAGGGAGAGGGGTATATATTAGATAAGTTTAAAGAAGAAGTAGCATTAGCTATAGACACCTACAA
AGGGTTAGTAGTTTTAGTTGGGTGTAGTCATGTGGGAATTGCTAATATATTAAATAATATAAGTAAAAGATTAAATAAAA
GAATATATGCTGTATTAGGCGGAACTCACTTGATTAAATGTGATGAAAATAGAATAAATAAAACCATAGAAGCTTTTAAT
AAATTAGATATTAATATTATAGGTGTTTCCCATTGTACAGGAGAATTTGCCACAATGAAATTAAAAGAATTAAAAGACAG
GTTTTTCTTAAATAATACAGGGAATATATTAGAAATATAA

Upstream 100 bases:

>100_bases
AAAGAAAATATAAATATATTTAAAAAATATAAATTTGTGGTAAAATTATAATATGTTTGTAATTAATTGACAATTATGGC
CTATTAGGGAGGAAAGGGAT

Downstream 100 bases:

>100_bases
AGCTATAGGAATAGATATTAAGCTTTTAATTTATCTATTCCTATAGCTTATTTTTATACCTTTAAATTTAAAGTACAAAA
GTATATTTAAATAATTATTA

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSIKITTLIEDSKNEESELIEEHGLSMFINTPRCNIIFDTGASGNFIKNADKLNIDLHETNYMILSHAHYDHCGGVRSFI
ENIKCYPELYVSKNFFGNSNKFKIGKDRENKYLGIDFDEKYLIDNGIPINYVEEDILEIEPNIFIVTNFKEDNSFEEFTS
NMVIKKGEGYILDKFKEEVALAIDTYKGLVVLVGCSHVGIANILNNISKRLNKRIYAVLGGTHLIKCDENRINKTIEAFN
KLDINIIGVSHCTGEFATMKLKELKDRFFLNNTGNILEI

Sequences:

>Translated_279_residues
MSIKITTLIEDSKNEESELIEEHGLSMFINTPRCNIIFDTGASGNFIKNADKLNIDLHETNYMILSHAHYDHCGGVRSFI
ENIKCYPELYVSKNFFGNSNKFKIGKDRENKYLGIDFDEKYLIDNGIPINYVEEDILEIEPNIFIVTNFKEDNSFEEFTS
NMVIKKGEGYILDKFKEEVALAIDTYKGLVVLVGCSHVGIANILNNISKRLNKRIYAVLGGTHLIKCDENRINKTIEAFN
KLDINIIGVSHCTGEFATMKLKELKDRFFLNNTGNILEI
>Mature_278_residues
SIKITTLIEDSKNEESELIEEHGLSMFINTPRCNIIFDTGASGNFIKNADKLNIDLHETNYMILSHAHYDHCGGVRSFIE
NIKCYPELYVSKNFFGNSNKFKIGKDRENKYLGIDFDEKYLIDNGIPINYVEEDILEIEPNIFIVTNFKEDNSFEEFTSN
MVIKKGEGYILDKFKEEVALAIDTYKGLVVLVGCSHVGIANILNNISKRLNKRIYAVLGGTHLIKCDENRINKTIEAFNK
LDINIIGVSHCTGEFATMKLKELKDRFFLNNTGNILEI

Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 31841; Mature: 31710

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKITTLIEDSKNEESELIEEHGLSMFINTPRCNIIFDTGASGNFIKNADKLNIDLHET
CEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCCEECCCCEEEEEEECC
NYMILSHAHYDHCGGVRSFIENIKCYPELYVSKNFFGNSNKFKIGKDRENKYLGIDFDEK
CEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCEEEECCCCC
YLIDNGIPINYVEEDILEIEPNIFIVTNFKEDNSFEEFTSNMVIKKGEGYILDKFKEEVA
EEECCCCCCCHHCHHHEEECCCEEEEEECCCCCCHHHHHCCEEEECCCCEEHHHHHHHHE
LAIDTYKGLVVLVGCSHVGIANILNNISKRLNKRIYAVLGGTHLIKCDENRINKTIEAFN
EEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCEEEEEECHHHHHHHHHHHH
KLDINIIGVSHCTGEFATMKLKELKDRFFLNNTGNILEI
CCEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCEEEC
>Mature Secondary Structure 
SIKITTLIEDSKNEESELIEEHGLSMFINTPRCNIIFDTGASGNFIKNADKLNIDLHET
EEEEEEEEECCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCCEECCCCEEEEEEECC
NYMILSHAHYDHCGGVRSFIENIKCYPELYVSKNFFGNSNKFKIGKDRENKYLGIDFDEK
CEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCEEEECCCCC
YLIDNGIPINYVEEDILEIEPNIFIVTNFKEDNSFEEFTSNMVIKKGEGYILDKFKEEVA
EEECCCCCCCHHCHHHEEECCCEEEEEECCCCCCHHHHHCCEEEECCCCEEHHHHHHHHE
LAIDTYKGLVVLVGCSHVGIANILNNISKRLNKRIYAVLGGTHLIKCDENRINKTIEAFN
EEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCEEEEEECHHHHHHHHHHHH
KLDINIIGVSHCTGEFATMKLKELKDRFFLNNTGNILEI
CCEEEEEEEECCCCCHHHHHHHHHHHHEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]