| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754616
Identifier: 170754616
GI number: 170754616
Start: 324497
End: 325606
Strand: Direct
Name: 170754616
Synonym: CLD_0502
Alternate gene names: NA
Gene position: 324497-325606 (Clockwise)
Preceding gene: 170757560
Following gene: 170754460
Centisome position: 8.2
GC content: 30.09
Gene sequence:
>1110_bases ATGATTTTATTAGAAATGAAACGTCGCTTATATACAAAAAACGTATTATTATCTATATTGGGTATTCTAATTATAACTAT AGGCTTGAATTTTATAACAGTAAATGGCCAAAAAGATTTTATTTATAATTTAAAACAAAAGGTTTCCTATGAGGGAGATA TTACAGAGAAAAACCTTTCTTTAGCCTTAAAGAAAGTGCGAGATGAAAAATCTGAAGATTACTATTACGAATCACAGACT TGGGTAATTAACGGTCTTGTCAAGAACTATGAAGGAGTTCTTTATAATGAGAATAAAATCGAAGACTATCCTGATAAATA TGCTACAGAATTTTATGATTGTTGGAGAAATAAATTTAAGGCATTAATTGAAAGGCTTCCAGTATCACAGCAGCCAGCTG CCATGAAAAAGTTAAGCAAAGTGAAGACCCCATTTGTACAATATACTGGTCATTATTTTTACGGTGATGTTTTTTTAAAT ATGAAGTTACTTTTCATAATAATTATATTTTTAGTCATATTCTTTGCTTCAGGAACCTATTCTGACAGCTTTGAAGATGA GAGCATAGAAATTATTAGAACTACTAAAAGTTATAAAAAGAATATGATGATTAGAACTTTACCAGTAATTTTTTATGGAA TTTTATTGACACTAATCGCTACTTTAGGAACAGTAGGAATAATGGGTTCTGCGGTAGGATTCAAAGCATTAAAAAGTAGT TTTAAGATGATTTCTTTATTTTCTTTTGGCAACTTTTCTATAGGGCAAGCTATCATGATAATGGTGGTAGCAGAAATCAT TGGAATCCTTGCGTTATCAACTTTGATGGGATATATTTCTCTTAAAACAAAGAAAACCACCACAGCTATAGCTTCAGGTG TTAGTTTAAGTATATTTTATATGGTAGGAACCCAAATTGAGTTAATTTCAACAAGCTTTATGAAGCATGTATTAAATGCA ATTTCTATGGCTAGTTCTCAGATATCAGATAATTTGTCTGGATTTTCCTTCAATTTTGGAATGTGGGAACCATATGTAAT TATGTTGGAAATTTTGATGGTGTTTATATTGTTCATTGTGGCACTAGCTGTTTCTATTAATCACAGCTAA
Upstream 100 bases:
>100_bases GCGTTTTTGTATTTCAAACTTTGCTCAGTTATCAGTTTATTGGTACTTTTTATCAGTTTGATAATTGGTTCATGGAATTA CGTTAGGAGGTAATAAATTC
Downstream 100 bases:
>100_bases TCATCCGTATTATTGTGGTACGAACCTTATCTTATTTAAAGATATTTTGGATTCAAATTTTTAGCTAATACATTTTGAAG TGCACCCCAAAGTTTAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MILLEMKRRLYTKNVLLSILGILIITIGLNFITVNGQKDFIYNLKQKVSYEGDITEKNLSLALKKVRDEKSEDYYYESQT WVINGLVKNYEGVLYNENKIEDYPDKYATEFYDCWRNKFKALIERLPVSQQPAAMKKLSKVKTPFVQYTGHYFYGDVFLN MKLLFIIIIFLVIFFASGTYSDSFEDESIEIIRTTKSYKKNMMIRTLPVIFYGILLTLIATLGTVGIMGSAVGFKALKSS FKMISLFSFGNFSIGQAIMIMVVAEIIGILALSTLMGYISLKTKKTTTAIASGVSLSIFYMVGTQIELISTSFMKHVLNA ISMASSQISDNLSGFSFNFGMWEPYVIMLEILMVFILFIVALAVSINHS
Sequences:
>Translated_369_residues MILLEMKRRLYTKNVLLSILGILIITIGLNFITVNGQKDFIYNLKQKVSYEGDITEKNLSLALKKVRDEKSEDYYYESQT WVINGLVKNYEGVLYNENKIEDYPDKYATEFYDCWRNKFKALIERLPVSQQPAAMKKLSKVKTPFVQYTGHYFYGDVFLN MKLLFIIIIFLVIFFASGTYSDSFEDESIEIIRTTKSYKKNMMIRTLPVIFYGILLTLIATLGTVGIMGSAVGFKALKSS FKMISLFSFGNFSIGQAIMIMVVAEIIGILALSTLMGYISLKTKKTTTAIASGVSLSIFYMVGTQIELISTSFMKHVLNA ISMASSQISDNLSGFSFNFGMWEPYVIMLEILMVFILFIVALAVSINHS >Mature_369_residues MILLEMKRRLYTKNVLLSILGILIITIGLNFITVNGQKDFIYNLKQKVSYEGDITEKNLSLALKKVRDEKSEDYYYESQT WVINGLVKNYEGVLYNENKIEDYPDKYATEFYDCWRNKFKALIERLPVSQQPAAMKKLSKVKTPFVQYTGHYFYGDVFLN MKLLFIIIIFLVIFFASGTYSDSFEDESIEIIRTTKSYKKNMMIRTLPVIFYGILLTLIATLGTVGIMGSAVGFKALKSS FKMISLFSFGNFSIGQAIMIMVVAEIIGILALSTLMGYISLKTKKTTTAIASGVSLSIFYMVGTQIELISTSFMKHVLNA ISMASSQISDNLSGFSFNFGMWEPYVIMLEILMVFILFIVALAVSINHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41858; Mature: 41858
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLEMKRRLYTKNVLLSILGILIITIGLNFITVNGQKDFIYNLKQKVSYEGDITEKNLS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHH LALKKVRDEKSEDYYYESQTWVINGLVKNYEGVLYNENKIEDYPDKYATEFYDCWRNKFK HHHHHHHCCCCCCCEECCCCEEEHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH ALIERLPVSQQPAAMKKLSKVKTPFVQYTGHYFYGDVFLNMKLLFIIIIFLVIFFASGTY HHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC SDSFEDESIEIIRTTKSYKKNMMIRTLPVIFYGILLTLIATLGTVGIMGSAVGFKALKSS CCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKMISLFSFGNFSIGQAIMIMVVAEIIGILALSTLMGYISLKTKKTTTAIASGVSLSIFY HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEE MVGTQIELISTSFMKHVLNAISMASSQISDNLSGFSFNFGMWEPYVIMLEILMVFILFIV EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH ALAVSINHS HHHHHCCCC >Mature Secondary Structure MILLEMKRRLYTKNVLLSILGILIITIGLNFITVNGQKDFIYNLKQKVSYEGDITEKNLS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHH LALKKVRDEKSEDYYYESQTWVINGLVKNYEGVLYNENKIEDYPDKYATEFYDCWRNKFK HHHHHHHCCCCCCCEECCCCEEEHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH ALIERLPVSQQPAAMKKLSKVKTPFVQYTGHYFYGDVFLNMKLLFIIIIFLVIFFASGTY HHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC SDSFEDESIEIIRTTKSYKKNMMIRTLPVIFYGILLTLIATLGTVGIMGSAVGFKALKSS CCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKMISLFSFGNFSIGQAIMIMVVAEIIGILALSTLMGYISLKTKKTTTAIASGVSLSIFY HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEE MVGTQIELISTSFMKHVLNAISMASSQISDNLSGFSFNFGMWEPYVIMLEILMVFILFIV EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH ALAVSINHS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA