| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754486
Identifier: 170754486
GI number: 170754486
Start: 1057491
End: 1057835
Strand: Direct
Name: 170754486
Synonym: CLD_3617
Alternate gene names: NA
Gene position: 1057491-1057835 (Clockwise)
Preceding gene: 170757047
Following gene: 170755899
Centisome position: 26.72
GC content: 26.96
Gene sequence:
>345_bases ATGATGAAATCAAAATCATGGATTTTATGGATCATTGGTGCAATTTGTCTTGTAATTGCAGGAATAATGAGGCTTATTGA AAAGAAATATTCAAGTGGGGTTATTTTTATAGTTTTAGGAGTAGCATATGTTATTTTTAGTATAACTAGCTATAAGGCTA TTAATAAAATTCGTAAAAATCCATTATCTGATGAAGAATTAAAAAATTTGGATAATGAATTAAGAGAACTAATTACAGAT GGAGAAAGGATTAAAGCAATTAAAAAATATAGAATTGCTACTGGTACTGGATTAATTGAAGCCAAAGAATATGTTGATTC TTTAAGCAAAGAGGAAACAAAATAG
Upstream 100 bases:
>100_bases GTGAAAACTTAGTTAACGATTTAATTATTATTGATCATAATTAATTATATATCAACAATAGTAATTTTGTATTAATTATT AAAACTTTTAGGAGGAGTAT
Downstream 100 bases:
>100_bases ATGAAATTTTTTTTGTTATGGCGCAAAAGTAGGGTTTTTTCAACTAAAAATAGATAAGGTGGTAATCTATGATTATTGAA AATAAAACAATAGAAGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MMKSKSWILWIIGAICLVIAGIMRLIEKKYSSGVIFIVLGVAYVIFSITSYKAINKIRKNPLSDEELKNLDNELRELITD GERIKAIKKYRIATGTGLIEAKEYVDSLSKEETK
Sequences:
>Translated_114_residues MMKSKSWILWIIGAICLVIAGIMRLIEKKYSSGVIFIVLGVAYVIFSITSYKAINKIRKNPLSDEELKNLDNELRELITD GERIKAIKKYRIATGTGLIEAKEYVDSLSKEETK >Mature_114_residues MMKSKSWILWIIGAICLVIAGIMRLIEKKYSSGVIFIVLGVAYVIFSITSYKAINKIRKNPLSDEELKNLDNELRELITD GERIKAIKKYRIATGTGLIEAKEYVDSLSKEETK
Specific function: Unknown
COG id: COG0222
COG function: function code J; Ribosomal protein L7/L12
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12941; Mature: 12941
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKSKSWILWIIGAICLVIAGIMRLIEKKYSSGVIFIVLGVAYVIFSITSYKAINKIRKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PLSDEELKNLDNELRELITDGERIKAIKKYRIATGTGLIEAKEYVDSLSKEETK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMKSKSWILWIIGAICLVIAGIMRLIEKKYSSGVIFIVLGVAYVIFSITSYKAINKIRKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PLSDEELKNLDNELRELITDGERIKAIKKYRIATGTGLIEAKEYVDSLSKEETK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA