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The map label for this gene is 170754470

Identifier: 170754470

GI number: 170754470

Start: 711096

End: 711962

Strand: Direct

Name: 170754470

Synonym: CLD_0164

Alternate gene names: NA

Gene position: 711096-711962 (Clockwise)

Preceding gene: 170757095

Following gene: 170755532

Centisome position: 17.96

GC content: 31.37

Gene sequence:

>867_bases
TTGGAAAAAATTGCATTGATTACTGATACAACTAGTGATTTACCAGAAGATATACTAGAAAAATATAACATAAAGCAGCT
AGCTTTTAGAATAATATATAAAGATAGAGAACTTAAAGATAGATTTGATATAACTTCTAAAGAGGTTTATGAAAATTTGG
AAGTAGAAGTTCCTACATCCTCACTACCATCTATGGAGGATATGGATAATCTTTTTACAGAGTTAGAGGAAGAAGGATAT
ACCCATGTAATAGCTGTAGTTTTATCCAGTGGATTATCAGGAATATATAATGGAATGAAAATAGTAAGTGAAAACCATCC
GAAACTTACAACATATATATGTGATTCTAAATCTATATCTTTAGGTGAAGGCGTATTACTAATGGAATCTGCAAGAATGC
TAAAAGAGGGTAAAAGTTTTAATCAAATAGTTGAGGCTATTCCTAAAATAAGAGAAAATGTTAAAACATTTTTTGTGGTG
GGAACCCTTGAATATCTAAAAAAAGGTGGAAGAATAGGAAAAGTTGCTGGAACTATAGCAGAGCTTTTAAATATTAAACC
TATAATTTCTATAGATAATGAAGACGGCAAATATTATACATATACAAAAGTAAGGGGAAGAAAACAATCTTTAGCTAACC
TTATAGATATAGCAAAAGAATTTTTGGAAAAAGGTAAATGTAAAGTTTATGTTATGCACGGAAATGCAGAAGAAGAGGCT
AAGGCTGTTTTTGAAAAGCTTAAAAACTTACCAAATGTTACTTTTGCTATGCTTGGAGGATGCATAAGCCCTGTTTCAGG
TGCTCATAGTGGTCCAGGTCTAGTGGGTGTTGCATGCCTTAGAGATATGGATTATTGTGGAAATTAA

Upstream 100 bases:

>100_bases
AAAATTTATTATATCTTATTTTTTTGAATCTATTGTCATATAATATTAAAGTGTTATAATTAACCTATATTCATATATGG
TTATTTAGGAGGAATTTCAA

Downstream 100 bases:

>100_bases
TTTGGATTTACAAATAATAATATTAGTAAATTATCTAAGCAAATGTAATGAAAAACTAAATAAATTAAAAGCCTTAATCA
TAAAGTAAATTTTTTTTTAA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTSSLPSMEDMDNLFTELEEEGY
THVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSISLGEGVLLMESARMLKEGKSFNQIVEAIPKIRENVKTFFVV
GTLEYLKKGGRIGKVAGTIAELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKVYVMHGNAEEEA
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN

Sequences:

>Translated_288_residues
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTSSLPSMEDMDNLFTELEEEGY
THVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSISLGEGVLLMESARMLKEGKSFNQIVEAIPKIRENVKTFFVV
GTLEYLKKGGRIGKVAGTIAELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKVYVMHGNAEEEA
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN
>Mature_288_residues
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTSSLPSMEDMDNLFTELEEEGY
THVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSISLGEGVLLMESARMLKEGKSFNQIVEAIPKIRENVKTFFVV
GTLEYLKKGGRIGKVAGTIAELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKVYVMHGNAEEEA
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32010; Mature: 32010

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTS
CCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCEECCCC
SLPSMEDMDNLFTELEEEGYTHVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSIS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCHHHCCCCCCEEEEEEECCCCCC
LGEGVLLMESARMLKEGKSFNQIVEAIPKIRENVKTFFVVGTLEYLKKGGRIGKVAGTIA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCCCHHHHHHHH
ELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKVYVMHGNAEEEA
HHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDITSKEVYENLEVEVPTS
CCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCEECCCC
SLPSMEDMDNLFTELEEEGYTHVIAVVLSSGLSGIYNGMKIVSENHPKLTTYICDSKSIS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCHHHCCCCCCEEEEEEECCCCCC
LGEGVLLMESARMLKEGKSFNQIVEAIPKIRENVKTFFVVGTLEYLKKGGRIGKVAGTIA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCCCHHHHHHHH
ELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFLEKGKCKVYVMHGNAEEEA
HHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
KAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLRDMDYCGN
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]