| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ywqG [H]
Identifier: 170754452
GI number: 170754452
Start: 2266985
End: 2267773
Strand: Reverse
Name: ywqG [H]
Synonym: CLD_2508
Alternate gene names: 170754452
Gene position: 2267773-2266985 (Counterclockwise)
Preceding gene: 170756533
Following gene: 170755481
Centisome position: 57.29
GC content: 30.16
Gene sequence:
>789_bases ATGAAAAAATCAAAATTAGAATTACCTGAAAGCTTAGAGAAGTTTAGAGGTGAGATAGAAAAAACTATAAAACCTTATAT AAAAATTAAATTAAAAGAACAAAAGACAATGCCCTGGGAAAGTAAACTAGGAGGAGATCCTTATCTAAAGATTGGTATGG AATATCCTAAAGCATCTAATGGGGAGTATTTGAGATTATTAGCTCAGATAAATTTTGAGGAAGTTCCACAGCTAGAGTCC TTCCCACAAAAAGGCATATTGCAATTTTATATATTAGCTGATGATGTGTATGGGCTTGCTCTTCAGAATCAGTGCATACA AGACACATTTAGAGTAATATACATACCTGATGTAGTAAAAAATGAAGAAAACTTAATAAAAGACTTTTCATTTTTAGGAG AGTTAGAAGAAGATTGGTACATGCCTTTTAGTAATGAAGGTAAAATAGAATTTCCATCAGAAGAATATATGCCTGTATCC TGGGAAGATTATAGATTTAATGATATATACAGTGGCATTAATTTACCAGAAGAAGTAGTAGATGACTATATCGAAAATTT AAGCGCTGATGGATGTAAAATAGGAGGATATCCTGCTTTTACTCAATCTGATCCAAGATATTATGATAAAAATCTAGAAA GATTTGATACATTATTGCTTCAATTAGATTGTGAAGATGAATGCGATTTAATGTTTGGAGATGCTGGAGTAGCAAACTTT TTTATAAATGAAGAAGATTTAAAAAGATTAGATTTTACTAAAGTTTTATATAATTGGGATTGCTGCTAA
Upstream 100 bases:
>100_bases TCTTTATAAAGACCATAATACATAGATAGATAAGGATAGAGGACAACTAAAGTATTTTGTGCATAGTGAGATTAATTTTA GTATGAATGGAGAGATATCA
Downstream 100 bases:
>100_bases GGATAAACAGAGTTCTTGGCTTCAGAGGGAGTTTTTACTCCCACTAAAGCTTAGAAATCGTTATCCAGGGACATAGCCGC TCTTTACTCCAACTTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKKSKLELPESLEKFRGEIEKTIKPYIKIKLKEQKTMPWESKLGGDPYLKIGMEYPKASNGEYLRLLAQINFEEVPQLES FPQKGILQFYILADDVYGLALQNQCIQDTFRVIYIPDVVKNEENLIKDFSFLGELEEDWYMPFSNEGKIEFPSEEYMPVS WEDYRFNDIYSGINLPEEVVDDYIENLSADGCKIGGYPAFTQSDPRYYDKNLERFDTLLLQLDCEDECDLMFGDAGVANF FINEEDLKRLDFTKVLYNWDCC
Sequences:
>Translated_262_residues MKKSKLELPESLEKFRGEIEKTIKPYIKIKLKEQKTMPWESKLGGDPYLKIGMEYPKASNGEYLRLLAQINFEEVPQLES FPQKGILQFYILADDVYGLALQNQCIQDTFRVIYIPDVVKNEENLIKDFSFLGELEEDWYMPFSNEGKIEFPSEEYMPVS WEDYRFNDIYSGINLPEEVVDDYIENLSADGCKIGGYPAFTQSDPRYYDKNLERFDTLLLQLDCEDECDLMFGDAGVANF FINEEDLKRLDFTKVLYNWDCC >Mature_262_residues MKKSKLELPESLEKFRGEIEKTIKPYIKIKLKEQKTMPWESKLGGDPYLKIGMEYPKASNGEYLRLLAQINFEEVPQLES FPQKGILQFYILADDVYGLALQNQCIQDTFRVIYIPDVVKNEENLIKDFSFLGELEEDWYMPFSNEGKIEFPSEEYMPVS WEDYRFNDIYSGINLPEEVVDDYIENLSADGCKIGGYPAFTQSDPRYYDKNLERFDTLLLQLDCEDECDLMFGDAGVANF FINEEDLKRLDFTKVLYNWDCC
Specific function: Unknown
COG id: COG3878
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015315 [H]
Pfam domain/function: PF09234 DUF1963 [H]
EC number: NA
Molecular weight: Translated: 30722; Mature: 30722
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSKLELPESLEKFRGEIEKTIKPYIKIKLKEQKTMPWESKLGGDPYLKIGMEYPKASN CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCEEEEEECCCCCCC GEYLRLLAQINFEEVPQLESFPQKGILQFYILADDVYGLALQNQCIQDTFRVIYIPDVVK CHHHHHEECCCHHHCCCHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCEEEEECCHHHC NEENLIKDFSFLGELEEDWYMPFSNEGKIEFPSEEYMPVSWEDYRFNDIYSGINLPEEVV CHHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHH DDYIENLSADGCKIGGYPAFTQSDPRYYDKNLERFDTLLLQLDCEDECDLMFGDAGVANF HHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCEEECCCCCEEE FINEEDLKRLDFTKVLYNWDCC EECHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKSKLELPESLEKFRGEIEKTIKPYIKIKLKEQKTMPWESKLGGDPYLKIGMEYPKASN CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCEEEEEECCCCCCC GEYLRLLAQINFEEVPQLESFPQKGILQFYILADDVYGLALQNQCIQDTFRVIYIPDVVK CHHHHHEECCCHHHCCCHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCEEEEECCHHHC NEENLIKDFSFLGELEEDWYMPFSNEGKIEFPSEEYMPVSWEDYRFNDIYSGINLPEEVV CHHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHH DDYIENLSADGCKIGGYPAFTQSDPRYYDKNLERFDTLLLQLDCEDECDLMFGDAGVANF HHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCEEECCCCCEEE FINEEDLKRLDFTKVLYNWDCC EECHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]